XLOC_016406 (CR392012.3)


Basic Information

Item Value
gene id XLOC_016406
gene name CR392012.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 26085162 ~ 26085279 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032312
TATGACAGCCATTTCACCCTAAAgtccaagaccggttactcactgaagctaagcagggctgagcctggtcagtacctggatgggagaccacatggtagAAGCTAGGTTGCTTTTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114644

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032312 True 118 rRNA 0.50 1 26085162 26085279

Neighbor

gene id symbol gene type direction distance location
XLOC_016405 CR392012.2 coding downstream 27250 26054113 ~ 26057912 (-)
XLOC_016404 cldn11a coding downstream 83989 25997426 ~ 26001173 (-)
XLOC_016403 NA coding downstream 226656 25852679 ~ 25858506 (-)
XLOC_016402 NA coding downstream 268330 25782699 ~ 25816832 (-)
XLOC_016401 ghsra coding downstream 531530 25551457 ~ 25553632 (-)
XLOC_016407 NA coding upstream 107430 26192709 ~ 26273332 (-)
XLOC_016408 NA coding upstream 201181 26286460 ~ 26287832 (-)
XLOC_016409 CT027702.1 coding upstream 349657 26434936 ~ 26436113 (-)
XLOC_016410 rabggtb coding upstream 377835 26463114 ~ 26469093 (-)
XLOC_016411 acadm coding upstream 384791 26470070 ~ 26476150 (-)
XLOC_016400 NA non-coding downstream 911142 25165250 ~ 25174020 (-)
XLOC_016398 CR786576.2 non-coding downstream 929204 25155842 ~ 25155958 (-)
XLOC_016421 dre-mir-124-1 non-coding upstream 560038 26645317 ~ 26645398 (-)
XLOC_016424 BX511023.2 non-coding upstream 954409 27039688 ~ 27039804 (-)

Expression


Co-expression Network