XLOC_016532



Basic Information


Item Value
gene id XLOC_016532
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 32783441 ~ 32786532 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033874
CTGGACTGTGCCTGGGCTTCTGCTAAACTCTGCTCCAGACTCATGCTCTAAAAAGGACAAGATTGCAGCTTCAAAATGAGCATCCAAAAATTCACCTAACTTTTCAGCATTATTCTATCTCATCTTCTCAGAcacatttaatttattgtaaatgatGTCAAACACTTGAAGTGCCCAAGTTGTTTTGGGAAACTGATTCTTTTGCAGCAGCAAAACTACTTCTTGTGGCATTGGGGCTTTTAGTGTCGATATGAAACGGCTGAGATCAATAAACCACTTCCTATGTCATCTGCTTCCTGTCTCAGACAGCTGTGATTTATTCAGAAGTGTTGATTGTATGCCTGAGAATCTGCACTGAAGCATTTCACACTGCTGACAATATGGTTTCTCTCGAGACTTACAACTCTTGAGCACCATTACCATCTGAAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033874 True 429 lncRNA 0.41 2 32783441 32786532

Neighbor


gene id symbol gene type direction distance location
XLOC_016531 bfsp2 coding downstream 13682 32761130 ~ 32769759 (-)
XLOC_016530 nrbp2a coding downstream 44906 32676002 ~ 32738535 (-)
XLOC_016527 puf60a coding downstream 111587 32650729 ~ 32671854 (-)
XLOC_016529 BX323559.2 coding downstream 116176 32667132 ~ 32667265 (-)
XLOC_016528 BX323559.1 coding downstream 116982 32666324 ~ 32666459 (-)
XLOC_016533 NA coding upstream 15233 32801765 ~ 32803728 (-)
XLOC_016534 prpf4ba coding upstream 25870 32812402 ~ 32826108 (-)
XLOC_016535 NA coding upstream 250841 33037373 ~ 33042159 (-)
XLOC_016536 NA coding upstream 433500 33220032 ~ 33224916 (-)
XLOC_016537 NA coding upstream 485309 33271841 ~ 33281735 (-)
XLOC_016526 NA non-coding downstream 132818 32646733 ~ 32650623 (-)
XLOC_016522 NA non-coding downstream 170363 32610636 ~ 32613078 (-)
XLOC_016513 BX663499.2 non-coding downstream 489925 32293401 ~ 32293516 (-)
XLOC_016540 BX548164.1 non-coding upstream 783390 33569922 ~ 33570039 (-)

Expression



Co-expression Network