XLOC_016533


Basic Information

Item Value
gene id XLOC_016533
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 32801765 ~ 32803728 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033875
GGGGTGGAGCTCAGGTAAATGGCAGGTGTGCAGCGAGCCACACTATCAGTCTGCGTCTTCCAGCTGTCTCCATCCCTCGTGCTTTCCATTGAAACTTTCTGTCGCATAAGAGCACGTGGAATACGTATTTGCATGCCAATAACAATGAAGACGACAGACATCACGTCACATCTTGAAACCTAAACGgtgtTACTGTTCTGTGTGGCATATTTAAGATGAACTGCACAAGAGTTTTTAGGATATGGACTGGGACTTACCATTTAGTTGCCTCTGCCCACTTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033875 True 281 lncRNA 0.46 2 32801765 32803728

Neighbor

gene id symbol gene type direction distance location
XLOC_016532 NA coding downstream 15233 32783441 ~ 32786532 (-)
XLOC_016531 bfsp2 coding downstream 32006 32761130 ~ 32769759 (-)
XLOC_016530 nrbp2a coding downstream 63230 32676002 ~ 32738535 (-)
XLOC_016527 puf60a coding downstream 129911 32650729 ~ 32671854 (-)
XLOC_016534 prpf4ba coding upstream 8674 32812402 ~ 32826108 (-)
XLOC_016535 NA coding upstream 233645 33037373 ~ 33042159 (-)
XLOC_016536 NA coding upstream 416304 33220032 ~ 33224916 (-)
XLOC_016537 NA coding upstream 468113 33271841 ~ 33281735 (-)
XLOC_016538 ccdc24 coding upstream 618683 33422411 ~ 33455274 (-)
XLOC_016529 BX323559.2 non-coding downstream 134500 32667132 ~ 32667265 (-)
XLOC_016528 BX323559.1 non-coding downstream 135306 32666324 ~ 32666459 (-)
XLOC_016526 NA non-coding downstream 151142 32646733 ~ 32650623 (-)
XLOC_016522 NA non-coding downstream 188687 32610636 ~ 32613078 (-)
XLOC_016540 BX548164.1 non-coding upstream 766194 33569922 ~ 33570039 (-)
XLOC_016542 NA non-coding upstream 978931 33782659 ~ 33785190 (-)

Expression


Co-expression Network