XLOC_016643



Basic Information


Item Value
gene id XLOC_016643
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37136668 ~ 37140483 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00032679
CTTGCTCCTCAATGACAAGACAAGCCAGTTTGTCGCAAAAATATGACGTCAGATACACAGTCTTTATTCATGTTTGTTCCTTTTGCTCTGACATTATGGAATTAATTGTGTTATTTCGAACGACAGTAATTATTTCATACTTATGGAATTTTGTCTTTCATAAAAATAACGTTATGCATGTTTAACATATATTCAGAACGATTTTAAACACGGTCTACGTTCGGgtaaaaataatttacataattttcTTCACTATATGGTATTTACACTGGGTAATTTATTTCTTTGAAACAGTGCCCCCTTCTTGTTTACTGATTCGTAATTCCTTCACTTCCGCATGTTCTTATGAGGTTTCGGTTTTAAAGTAGACCCGCTTTCATATCAGTGTTTGGTTGTCACAATTTATGTTGATCTGGACCTTGACATGGGATACGAGTGTGTCTAATCGATTCATTAATATCAATTAAAGAAAAGCCATGGCTCTAAATAGAGGCGCTATTGGATTATTCCTGAAGATTACTTGTCTACTTTTTTTGCTGACTGGTATTACAGGTCTTGGTGGTTCATTCTTGCTGCATAAATACAGAGTTTACGGCCTATTTTTTAGCAACCTTTATATCATTTTCCCAGCATTGCTGGCTGTTGTCAGTGGAGCCATTCTCTTTATCACTGGAAGCATTGGCTGTCTTGTGTCTAGCAAAAAACCTTCATGTGGACATGGATTGTTTGTTTATTTCCTCATTATTGTGTTTTGCGTTGTGGGTACCACTGCTGCATTGGCATACTTTTATCAGGGAAAGCTTGATGCAGAGTTGGCACCCCTTAAAGATGTGTTTCAGAACTACAGTAATAACAGTCAAGATCCGGATACCAAAGCAGTGGATCGTCTCCAGAGTGAGttGCAGTGTTGTGGTGTCATGAACTACACAGATTGGTTGCAAACGCCCTGGTTTAATCACAGTGGGAAATATGATGTTCCTCAAAGCTGCTGCAACACAACCTTTCACTCGTGCAATGGGACTTTAGATGCACCCATGCTTCTCTACAATGAGGCCTGTCAGGTTAAACTTAAGGAGCTATTACTACTTGTGGTGCACATCATCCACATAACATCTTTAGTGGTTCTTGTTTTGCTGGTATTGTCTTGGATTACAGTGGGACAGCTAATGAGATACCCAGTCCCACAAGAGTATCGAATTCTGGACCAGGACTAAAAACATCCAAATATCTTTAAACAATATTCCTAAATGCctgcatattacattttaatgtctttttataTATCACTTGTTATTATCTATTCTAATACATAAAGCACTCCATGTTTTCCTGAATTTCTAAGGTGTGactattcatatttttatagatGTTTTATTTACACACCAAGGCATTTACTTTGCACAATAAAATAGATACTACTGAAt

Function


GO:

id name namespace
GO:0050878 regulation of body fluid levels biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0030193 regulation of blood coagulation biological_process
GO:2000257 regulation of protein activation cascade biological_process
GO:0007596 blood coagulation biological_process
GO:1900046 regulation of hemostasis biological_process
GO:0007599 hemostasis biological_process
GO:0010466 negative regulation of peptidase activity biological_process
GO:0045861 negative regulation of proteolysis biological_process
GO:0061041 regulation of wound healing biological_process
GO:1903034 regulation of response to wounding biological_process
GO:0052548 regulation of endopeptidase activity biological_process
GO:0051346 negative regulation of hydrolase activity biological_process
GO:0050817 coagulation biological_process
GO:0050818 regulation of coagulation biological_process
GO:1990904 ribonucleoprotein complex cellular_component
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00032679 True 1424 lncRNA 0.37 7 37136668 37140483

Neighbor


gene id symbol gene type direction distance location
XLOC_016642 elavl1a coding downstream 2470 37123338 ~ 37134198 (-)
XLOC_016641 zgc:101744 coding downstream 33046 37089362 ~ 37103622 (-)
XLOC_016640 diras1b coding downstream 76702 37059304 ~ 37059966 (-)
XLOC_016639 gng7 coding downstream 92763 36990024 ~ 37043905 (-)
XLOC_016638 NA coding downstream 202976 36932699 ~ 36933692 (-)
XLOC_016644 NA coding upstream 13276 37153759 ~ 37155791 (-)
XLOC_016645 NA coding upstream 16718 37157201 ~ 37157600 (-)
XLOC_016646 NA coding upstream 31325 37171808 ~ 37172825 (-)
XLOC_016647 apoda.1 coding upstream 67316 37207799 ~ 37210397 (-)
XLOC_016648 nadkb coding upstream 126758 37267241 ~ 37281748 (-)
XLOC_016635 NA non-coding downstream 231274 36886743 ~ 36905394 (-)
XLOC_016633 NA non-coding downstream 310375 36747178 ~ 36826293 (-)
XLOC_016619 NA non-coding downstream 711065 36379239 ~ 36425603 (-)
XLOC_016555 NA non-coding downstream 1058030 36076196 ~ 36078638 (-)
XLOC_016651 BX511231.1 non-coding upstream 264868 37405351 ~ 37409157 (-)
XLOC_016652 NA non-coding upstream 272921 37413404 ~ 37416465 (-)

Expression



Co-expression Network