XLOC_016645


Basic Information

Item Value
gene id XLOC_016645
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37157201 ~ 37157600 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033888
tttagtgatTCCTCCGcctaccactagaaggaagccacACTTGGAGAACCACTGGTATCGATAGTAAGATAGGCCTTGTCTGTGTAAGGTTTTTTCAACAAACGGAGAGCAGGCAGAACGAGGGAGACTCGCAATCAAAGAATCGGTGGAGATACAGTATGTCTAAACAATGCTGGAGAACAGCAGGGTTTGTTCTGTTGgtgttgtttttgtcttttttaggtttgagtggagcagaagaaggagactcaTGACGGGAACAGTGGAGATATACTTGAGCTCAGAAagcagActggcatggagcatgtggag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033888 True 312 lncRNA 0.46 2 37157201 37157600

Neighbor

gene id symbol gene type direction distance location
XLOC_016644 NA coding downstream 1410 37153759 ~ 37155791 (-)
XLOC_016643 NA coding downstream 16718 37136668 ~ 37140483 (-)
XLOC_016642 elavl1a coding downstream 23003 37123338 ~ 37134198 (-)
XLOC_016641 zgc:101744 coding downstream 53579 37089362 ~ 37103622 (-)
XLOC_016640 diras1b coding downstream 97235 37059304 ~ 37059966 (-)
XLOC_016646 NA coding upstream 14208 37171808 ~ 37172825 (-)
XLOC_016647 apoda.1 coding upstream 50199 37207799 ~ 37210397 (-)
XLOC_016648 nadkb coding upstream 109641 37267241 ~ 37281748 (-)
XLOC_016649 skila coding upstream 149726 37307326 ~ 37353098 (-)
XLOC_016650 prkci coding upstream 207951 37365551 ~ 37401600 (-)
XLOC_016638 NA non-coding downstream 223509 36932699 ~ 36933692 (-)
XLOC_016635 NA non-coding downstream 251807 36886743 ~ 36905394 (-)
XLOC_016633 NA non-coding downstream 330908 36747178 ~ 36826293 (-)
XLOC_016651 BX511231.1 non-coding upstream 247751 37405351 ~ 37409157 (-)
XLOC_016652 NA non-coding upstream 255804 37413404 ~ 37416465 (-)
XLOC_016662 NA non-coding upstream 656063 37813663 ~ 37815373 (-)
XLOC_016680 NA non-coding upstream 986562 38144162 ~ 38145701 (-)

Expression


Co-expression Network