XLOC_016832 (ftr24)


Basic Information

Item Value
gene id XLOC_016832
gene name ftr24
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47916204 ~ 47923803 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032968
GAAGTAGTAGAGAAATGACGGGCAGCCAAGTTCCTTTGAACAACATATTTTAACAGTTGTGCTTGAATTTAACTGGACTTATTCAAGTAAAGtcTAAGCACCTTCAAATGGCAGAAGCCAATATTTCCGTGGCTGAGGATCAGTTCAACTGTTCGATCTGTCTGGATCTCCTGAGGGAGCCAGTGACCATCCCCTGCGGACACAGTTATTGCATGAACTGTATTACAGACTACTGGAATCAAAATGATCAGAGGAGAGTTTACAGCTGCCCTCAGTGCAGAGAAACCTTCACTCCAAGACCTGCTTTAAACAAAAACGTGATGTTTGCTGAAATTGTGCAGAAACTGAGGGGGGCATCATTTCAGACTGCTCCAGCGCTTAGTTATGCAGGACCTGGAGATGTGGAGTGTGATGTTTGCACCGAAAGGAAATACAAAGCTGTTAAATCCTGTCTGGCGTGTCTACAGTCTTACTGTCAAACTCACTTTGAGCGCCATGAGGAGTTTCACTCCGGCAGACATAAAGTGACCAAAGCTACTGGACAACTGAAGCAGATGATCTGCCCAAAACATGACAAACTGCTGGAGGTTTACTGTCGCACTGATCAGAAGTGCATTTGTTTACTGTGTACGGTAGACGAACATAAAAATCATGACACCGTATCGACTACATCAGAGAGGACGGACATACAGAAACAGCTGGAAGAGACACAGGCTCATTTCCAGCAGAAGATCCAGGAGAGAGAGAAGAGGATGCAGGAGCTGAAAGACGCTGTGAAGACCAACAGGCACCTTGCACAGGCGGCAGAGAAGGATAGTGAGGAGATCTTTGCTGAACTCATCCGATTCATTGAGAGAAGCCGATCTGAAGTTATATGGAGGATCAGAAATCAGGAAAAGGATGCAAAGAGTGAAGTTGAAGGACTCTTGAAGGAACTGGAGCAGGAGATTGAAGATCTAAAGTGGAGAAACACTGAGCTGGAGCAGCTTTTACACACTGATGATCACATACATTTCCTACAGAGATTTCAGTCTCTCTGTGAACCTTCAAAAATGACCGACATATCCAGAGCCAATGTCAGTTCTGTCCTCCTTAATGAAGATGTGGGGAGATCTGTCTCTCAGCTGAAAGAAAAACTGGAGCAGTTCTGTAAAGAGGAGATTGAGAACATATTTTATAAagAAGCAAAAATCAACAGAGCTTACCAGACTGAACCCAAGACCAGGAAGGACTTCCTACaatatttcctTCAACTCTCTCTGGATCGAAACACAGCGCATCAATCCCTCTGCCTGTCtgagggcaacacagtggcgacTTACACTCACACAGCTCAGCACTTACCCGACCATCCTGACAGATTTACCAACTTTTTTGGTGTGCTGTGTAGAGAGAGCGTGAGCGGACGCTGCTACTGGGAGGTGGAGTCGATTGGGAACGAGAGACTGTATGGAGTCGGTGTGGCGGTCTCCTATAAGAGCATCAACAGGAAGGGAACGAGAACTACAAGTGGATTCGGATATAATGACCAATCCTGGAAAATGATCTGCTCTAGATCCCGTTACATTTTCTGGCACAACAACATCAAGACGAAACTCCCTGCGCTCTTCAGATCCTCCAGAATAGGAGTGTATGTTGATCACAGAGCTGGAGTTCTGTCTTTCTTCAGTGTTTCTGACACAACAATGAACCTCATTCACAGAGTCCAGACAACATTCACTCAACCACTCTATCCTGGGTTTTGGATAGATCCAGGCTCAAGGCTTAAAATTTGTAGACTTTAATGATCCTATACCAGACTAGATTTGGGACATAAACCAGAAATTACTAGATTAAGAGTCTCTTAATCTATTTCATTCCATAAGGACCTGTCCCAAAACTGaaaaagtacattaaaaaaagctaAAGAACA

Function

symbol description
ftr24 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050731-2 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000008396

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032968 True 1912 mRNA 0.44 7 47916204 47923803

Neighbor

gene id symbol gene type direction distance location
XLOC_016831 ftr22 coding downstream 12114 47900506 ~ 47904090 (-)
XLOC_016830 ftr05 coding downstream 45555 47869807 ~ 47870649 (-)
XLOC_016829 CU929191.1 coding downstream 63120 47852969 ~ 47853084 (-)
XLOC_016828 cul3a coding downstream 234750 47644041 ~ 47681454 (-)
XLOC_016827 ap1s3b coding downstream 295398 47587238 ~ 47620806 (-)
XLOC_016833 fzd8b coding upstream 31357 47955160 ~ 47957673 (-)
XLOC_016834 NA coding upstream 62644 47986447 ~ 48010815 (-)
XLOC_016835 pfkpb coding upstream 195691 48119494 ~ 48171441 (-)
XLOC_016836 snorc coding upstream 258801 48182604 ~ 48196092 (-)
XLOC_016837 gigyf2 coding upstream 279475 48203278 ~ 48255843 (-)
XLOC_016826 BX085193.3 non-coding downstream 370565 47541737 ~ 47545639 (-)
XLOC_016825 BX085193.1 non-coding downstream 451368 47432087 ~ 47464836 (-)
XLOC_016823 NA non-coding downstream 549052 47357321 ~ 47367152 (-)
XLOC_016822 BX085193.2 non-coding downstream 567422 47345041 ~ 47348782 (-)
XLOC_016838 NA non-coding upstream 339628 48263431 ~ 48265811 (-)
XLOC_016839 NA non-coding upstream 343541 48267344 ~ 48275543 (-)
XLOC_016842 NA non-coding upstream 471140 48394943 ~ 48396061 (-)
XLOC_016843 NA non-coding upstream 481241 48405044 ~ 48406205 (-)

Expression


Co-expression Network