XLOC_016932 (LO018490.1)


Basic Information

Item Value
gene id XLOC_016932
gene name LO018490.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 52782056 ~ 52795722 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033088
aataaaattacggGTTCTAAGTTCtgcttgttaaaaccaaaaGACACTGGTGTGGGGAAATCGAGTATCGTGTGTCGGTTTGTTCAAGATCACTTTGACCACAACATTAGTCCGACAATAGGtgcATCATTTTTAACTAAGACCGTCCCCTCTGGAAATGAACTTCACAAATTTCTGATCTGGGACACTGCAGGACAAGAgcggTTTCATTCCCTGGCTCCCATGTATTACAGAGGCTCGGCAGCGGCTGTCATTGTTTATGACATCACAAAGCTTGACTCGTTCCAGACGTTAAAGAAGTGGGTGAAAGAGCTGAAGGAGCACGGGCCGGAGGATATAGTGGTGGCCATCGCTGGAAATAAGAACGATCTGGGTGACATCAGGGAAGTTCCAACTAAGGAGGCGAAAGAATTTGCAGAGTCGATTGCAGCCATATTTATGGAGACCAGTGCCAGAAATGCTGTAAACATAGAGGAGCTGTTCCAAAAAATCAGTCGACAGATCCCTCCACTGGAGAACACTGATGCAGACAGCCACGACTCCTTCAAGCTGACCCGACAGCCTCCTCCAGCCACCAAACGCTGCTGTTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115832

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033088 True 591 mRNA 0.47 7 52782056 52795722

Neighbor

gene id symbol gene type direction distance location
XLOC_016931 NA coding downstream 100268 52628252 ~ 52681788 (-)
XLOC_016930 gna11b coding downstream 231921 52469854 ~ 52550135 (-)
XLOC_016929 NA coding downstream 313117 52465535 ~ 52468939 (-)
XLOC_016928 chico coding downstream 326531 52406565 ~ 52455525 (-)
XLOC_016927 tle2c coding downstream 416805 52332022 ~ 52365251 (-)
XLOC_016933 ralbp1 coding upstream 15140 52810862 ~ 52841762 (-)
XLOC_016934 NA coding upstream 131974 52927696 ~ 52929721 (-)
XLOC_016935 sirt6 coding upstream 269317 53065039 ~ 53201908 (-)
XLOC_016936 hsd11b1lb coding upstream 664151 53459873 ~ 53481912 (-)
XLOC_016937 admp coding upstream 687600 53483322 ~ 53500424 (-)
XLOC_016926 NA non-coding downstream 577984 52202119 ~ 52204072 (-)
XLOC_016925 NA non-coding downstream 678446 52100990 ~ 52103610 (-)
XLOC_016923 BX908782.1 non-coding downstream 931785 51850157 ~ 51850271 (-)
XLOC_016944 NA non-coding upstream 1357728 54153450 ~ 54155169 (-)
XLOC_016947 FQ378001.1 non-coding upstream 1931584 54727306 ~ 54727426 (-)
XLOC_016948 NA non-coding upstream 1988102 54783824 ~ 54787578 (-)
XLOC_016950 NA non-coding upstream 2187601 54983323 ~ 54984653 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000074_00553188_00557451 NA coding CI01000074 null 552252 ~ 557451 (-)