XLOC_016936 (hsd11b1lb)


Basic Information

Item Value
gene id XLOC_016936
gene name hsd11b1lb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 53459873 ~ 53481912 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033092
ATGAAGGTGCTTTTCGGGGTGTTTTTGCTGATTGCTGTCCTCACGTCTTTGATGTGGAGAGACACGTTTGACCCAGAGTCAATTCGTGGGACCCGAGTGTTGATCACAGGGGCCAGTTCAGGCATCGGGGAGCAGATGGCCTACCATTATGCAAAGTTTGGAGCTGAGATCGTCATCACCGCCAGACGATTGGAGGCTTTAAAAAAGGTCACCCAGAAGTGTGAGAAACTGGGCGCTAAGAAAATAATGTATGTGACCGGAGACATGTCTGACCCCGCTGACCCCGAGAGAGTCCTCAAATACACCATCGAGAAATTGGGCGGTCTGGATTTTCTAGTGTTAAATCATGTCGGAAACACTAACGTGGGGCTGTGGAACAGAGATGCAGATCATGTCAGGTCACTCATGCAGGTGAATTTTGTGAGTTACGTGCAGATGGCGGGAGCAGCTCTACCTGTGCTGGAAACATCCGGCGGCTCAATCATTGTAGTTTCCTCACTGGCAGGTAAGATAGCAAGTCCATTTGTAACTCCGTATTCATCTACTAAGTTTGCGATGAATGGATTCTTCGGAGCGTTGCAGAAGGAATTGGCCATCCAGAAAAGCAACGTGTCTGTGTCCATCCAGATCCTTGGCCTCATCGACACAGAATCAGCCATGAGGAAGATCAGAGGATACACCACGATGACGGCTTATCCTGCCAGTGAAGCCGCTCTGAGCATCATCAAAGCCGGAGCGACCCGTCAGAAAGTGGCTTTTTATCCCTGGTTCCACTATTTGACCTGCCTGATCAATGATATCTTCCCCTTTTTGACAGATCTGCTGTCAGGCCTCAGGTGGGATTAA

Function

symbol description
hsd11b1lb Predicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in cortisone reductase deficiency; cortisone reductase deficiency 2; and obesity. Orthologous to several human genes including HSD11B1L (hydroxysteroid 11-beta dehydrogenase 1 like).

GO:

id name namespace
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-101130-4 Predicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in cortisone reductase deficiency; cortisone reductase deficiency 2; and obesity. Orthologous to several human genes including HSD11B1L (hydroxysteroid 11-beta dehydrogenase 1 like).

Ensembl:

ensembl_id ENSDARG00000110341

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033092 True 846 mRNA 0.49 7 53459873 53481912

Neighbor

gene id symbol gene type direction distance location
XLOC_016935 sirt6 coding downstream 257965 53065039 ~ 53201908 (-)
XLOC_016934 NA coding downstream 530152 52927696 ~ 52929721 (-)
XLOC_016933 ralbp1 coding downstream 618111 52810862 ~ 52841762 (-)
XLOC_016932 LO018490.1 coding downstream 664151 52782056 ~ 52795722 (-)
XLOC_016931 NA coding downstream 778085 52628252 ~ 52681788 (-)
XLOC_016937 admp coding upstream 1410 53483322 ~ 53500424 (-)
XLOC_016938 im:7138239 coding upstream 19838 53501750 ~ 53525896 (-)
XLOC_016939 ccl25a coding upstream 100445 53582357 ~ 53592532 (-)
XLOC_016940 capsla coding upstream 408094 53890006 ~ 53896300 (-)
XLOC_016941 FO834855.1 coding upstream 427550 53909462 ~ 53925308 (-)
XLOC_016929 NA non-coding downstream 990934 52465535 ~ 52468939 (-)
XLOC_016926 NA non-coding downstream 1255801 52202119 ~ 52204072 (-)
XLOC_016925 NA non-coding downstream 1356263 52100990 ~ 52103610 (-)
XLOC_016944 NA non-coding upstream 671538 54153450 ~ 54155169 (-)
XLOC_016947 FQ378001.1 non-coding upstream 1245394 54727306 ~ 54727426 (-)
XLOC_016948 NA non-coding upstream 1301912 54783824 ~ 54787578 (-)
XLOC_016950 NA non-coding upstream 1501411 54983323 ~ 54984653 (-)
XLOC_016951 NA non-coding upstream 1577914 55059826 ~ 55071544 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01052392_00000373_00002024 NA coding CI01052392 null 242 ~ 2024 (-)