XLOC_016957 (EPS15L1)


Basic Information

Item Value
gene id XLOC_016957
gene name EPS15L1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 55751966 ~ 55779927 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033111
ATGGCGGCGCTCACGCCACTCAGTCAGCTGTTAAGTGGAAACCCTGCATATGAGAGCCTCTACAGACAGGTGGATCCAGCAAACACTGGGAGAGTTGGAGCTGCAGAAGCTGCTCAGTTCTTAAAGAAATCCGGGCTTTCAGACAGCACACTGGGTCAGATCTGGGATCTGTCCGATCCAGACAGAAAAGGTTACTTGGATAAAAAGGGCTTCTTCACTGCTCTGAGGCTGGTGGCGTCTGCTCAAGGAGGAAGTGATGTCAGTCTGAACAGTTTAAGCCAGAACATCTCCGCACCCATGCCTAAATTTAGAGATGCTGGCAGTCCGTCGCTGAATATAACTGGCTCTTCTGCTGATTCCAGCTGGACAGTGAAGCCGGAAGATAAAGCAAAGTATGACGGGATATTTGAGAGTCTGTCTCCGATCGGTGGGCTGCTGTCAGGTGATAAAGTGAAACTAGTCCTCATGAACTCAAACCTGCCTCTGGATGTGCTTGGAAAGATTTGGGATCTCAGTGACATTGACAAAGATGGAAGCTTGGATAAAGATGAGTTTTCAGTGGCGATGCACCTGGTTTACGCTGCCAGGGAGAAGGAGCCTGTGCCATCCAGCCTCCCGACATCTCTCATCCCTCCTTCCAAGCGTAAGAAGATAGCAGGCGCTCTTCCGGGATCCGTTCCTGTTCTTCCCTCTAGTCCATTCCTCCTCAAGGAGAACCTACGGCCCACGCCGGCGCTTTCCAAGAGTCCTCTGGGCAGCAGCACAAATCTATCTCCATCAAATTCCTTCAATCGCTCCACCCCGACTCCACCACAAACGCAAACACAGGCGTCGTCTGACCACTGGGTGGTGCCGGCGGATGACAGAGAGCAGTACGAGGAGATCTTTGAACTGGCTGACTCCGATTTCGATGGGATGGTTGGAGGAGGTGAAGTGAAGGACATTTTCATGAACTCCCGGCTGCCGCAGAGCGTCCTGGCACACATATGGTCGCTGGCAGACACCAAGGGCACCGGCAAACTCACCAAAGAGCAGTTCTGTCTGGCGATGCATTTGATTCAGGAGAGGGTTAAAGGAGTGGAGCCTCCGAAGAGTCTGACGCCTGAAATGATCCCACCATCAGAGAGAGGAGCTGCTAACACTCCTATTCTCTCTGCATACACACCGTCAGTGGGATCTGAATTGACACCATTGACTCCACTTACCAATTTTAGCAGGGACAGCAGCAGCAGTTCTGTTGGAAAGGTTGAGCTGTTGGGAATCAAGGATCTGGATGACATCAGCCAGGAGATCTCACAGCTGCAGAGTGAGAAACGCGTGTTAGAGACTGAAATCAGGCAGAAAGAGGAAGTCCTGCGACAGAGGAACAGCGAAATCCAGGAGGAGCAGAGAGGTCTGGAGAGAGAGAATGTGGATCTGCAGGAACTGGAACATCAGAAACGAGACGCTCAGGATCGACTGAATGAGATGGAGATGCAGAGAGTCAAACTGCAGAGCTCACTGGACGAGACCAAGAGCAAGTGGCAGGAGGAGAACGCCAAGGTGAAACACACTCGCCTTTCGGAGAATACACAAAACACTTATAATGCTGATGAGTGTTTAATATAA

Function

symbol description
eps15l1 Enables cadherin binding activity. Predicted to be involved in endocytosis and endosomal transport. Located in membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100700

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033111 True 1608 mRNA 0.51 15 55751966 55779927

Neighbor

gene id symbol gene type direction distance location
XLOC_016956 NA coding downstream 268 55684668 ~ 55751698 (-)
XLOC_016955 NA coding downstream 87991 55639371 ~ 55663975 (-)
XLOC_016954 tpm4b coding downstream 414381 55300425 ~ 55337585 (-)
XLOC_016953 rab8a coding downstream 453891 55270566 ~ 55298075 (-)
XLOC_016952 NA coding downstream 527391 55215186 ~ 55224575 (-)
XLOC_016958 calr3b coding upstream 3969 55783896 ~ 55797318 (-)
XLOC_016959 rx2 coding upstream 53498 55833425 ~ 55861351 (-)
XLOC_016960 cplx4c coding upstream 110746 55890673 ~ 56003820 (-)
XLOC_016961 CU013534.2 coding upstream 200300 55980227 ~ 56002115 (-)
XLOC_016962 CU013534.1 coding upstream 262585 56042512 ~ 56042630 (-)
XLOC_016951 NA non-coding downstream 680422 55059826 ~ 55071544 (-)
XLOC_016950 NA non-coding downstream 767313 54983323 ~ 54984653 (-)
XLOC_016963 NA non-coding upstream 280473 56060400 ~ 56095275 (-)
XLOC_016969 NA non-coding upstream 862211 56642138 ~ 56655769 (-)
XLOC_016971 NA non-coding upstream 1029365 56809292 ~ 56884888 (-)
XLOC_016972 NA non-coding upstream 1273092 57053019 ~ 57061935 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000075_01166008_01203828 NA coding CI01000075 null 1164952 ~ 1203828 (-)