XLOC_016977 (btbd2b)


Basic Information

Item Value
gene id XLOC_016977
gene name btbd2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 57206248 ~ 57227542 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033140
ATGGCTACAGGAGACAATAGCGGTCGGGTTCCGTGTTTAAATTTCTCGGTGCCCGGACCTTTGGGTAACAGTCAACCGAGCAACAGCCCTTTCGCATTGGCGGCGAGTCACGGAGGATCGGTCGGGGGCGGTGGAGGCTCTCAGGGGGTAACGAGACGCTCAAATCCTCAACCGGGGCCTCAGGCCCTTGAAAGCCCCGGTGTCGCGTCGGGACTTCCGCCGAACTTGATGAACGCTGTCCCGGCTGCCGCGGCGGTGGTGGGCCCGCTGGCTCCGGCCGCCTCGAACATGACAGGGAGCCCGTCTAACGCAGCGATGACACCGGCGGCCGCCACACACTCAGCCCTGTCCGCTCCACCAGCCGCTGCCGCCGTGCTTGTGTACCGGGAGCCTGTTTATAACTGGCAGGCGACGAAAAGCACCGTGAAAGAGAGATTTGCGTTTCTGTTCAATAATGAAGTACTGAGTGACGTTCACTTTCTAGTGGGTAAAGGAATGGGAGTCCAGCGGATACCTGCGCACAGGTTTGTTCTGGCGGTTGGCAGTGCAGTATTTGATGCCATGTTCAATGGAGGCATGGCCACCACGTCCACAGAGATCGAGCTCCCGGATGTAGAACCTGCTGCATTCCTTTCATTGCTTAAGTATGACATCTTATTTCCTTTTCGGCACGCATGCGTTACACTTTCCAGAAATATGCAGATCTTGTTTCTCCTCAGATTCCTGTACTCTGATGAAGTTCATATCGGACCCGAGACAGTGATGACGACTCTCTACACGGCTAAAAAATACGCTGTTCCGGCTCTAGAGGCACACTGTGTGGAGTTTCTGAAGAAGAACCTACGAGCGGATAATGCGTTCATGCTGCTTACACAAGCGAGGCTGTTTGATGAGCCGCAGTTGGCCAGTCTGTGTCTGGAGAACATCGATAAAAACACAGGAGACGCTCTGGCTGCAGAAGGATTCACTGATATTGATCTGGATACGCTGGTGGCAGTGTTGGAGAGAGATACTCTGGGTGTGCGAGAGGTTCATCTGTTCGGAGCAGCGGTCCGCTGGGCAGAAGCTGAAGCTCACCGGCAGCAGCTTCAGCCTACGCCGGAGAACAAGAGACGAGTGCTGGGAAAAGCCCTCAGCCTCATCCGCTTCCCTCTCATGACCATTGAGGAGTTCGCTGCAGGTCCTGCTCAGTCAGCCATTCTCACAGACAGGGAGGTCGTGAGTCTGTTCCTGCACTTCACGGTGAACCCTAAGCCACGTGTGGAGTTTATCGACAGGCCGCGCTGCTGTTTGCGGGGCAAAGAGTGCAGCATCACACGCTTCGGGCAGGTGGAAAGTCGCTGGGGCTACAGCGGGACCAGTGACCGGATCCGGTTCTCTGTCAGCCGCAGGATATTTATTGTGGGCTTTGGGCTTTATGGATCCATACACGGACCTACAGACTATCAGGTCAACATACAGatcATTCACACTGACAGTAACACAGTTCTGGGTCAGAACGACACGGGTTTCAGCTGTGACGGGTCTGCAAACACATTCAGAGTCATGTTTAAGGAGCCAGTGGAGGTTCTGCCCAACGTCAACTACACCGCCTGTGCTACATTAAAGGGTCCAGACTCGCACTACGGCACTAAAGGGATGAGGAAAGTCACTCACGAGTCTTCAGGCTCCGGCACCAAAACCTGCTTCACTTTCTGCTACGCCGCCGGGAACAACAACGGCACATCAGTGGAGGACGGACAGATCCCAGAAGTCATCTTTTACACGTAG
>TCONS_00033139
ATGGCTACAGGAGACAATAGCGGTCGGGTTCCGTGTTTAAATTTCTCGGTGCCCGGACCTTTGGGTAACAGTCAACCGAGCAACAGCCCTTTCGCATTGGCGGCGAGTCACGGAGGATCGGTCGGGGGCGGTGGAGGCTCTCAGGGGGTAACGAGACGCTCAAATCCTCAACCGGGGCCTCAGGCCCTTGAAAGCCCCGGTGTCGCGTCGGGACTTCCGCCGAACTTGATGAACGCTGTCCCGGCTGCCGCGGCGGTGGTGGGCCCGCTGGCTCCGGCCGCCTCGAACATGACAGGGAGCCCGTCTAACGCAGCGATGACACCGGCGGCCGCCACACACTCAGCCCTGTCCGCTCCACCAGCCGCTGCCGCCGTGCTTGTGTACCGGGAGCCTGTTTATAACTGGCAGGCGACGAAAAGCACCGTGAAAGAGAGATTTGCGTTTCTGTTCAATAATGAAGTACTGAGTGACGTTCACTTTCTAGTGGGTAAAGGAATGGGAGTCCAGCGGATACCTGCGCACAGGTTTGTTCTGGCGGTTGGCAGTGCAGTATTTGATGCCATGTTCAATGGAGGCATGGCCACCACGTCCACAGAGATCGAGCTCCCGGATGTAGAACCTGCTGCATTCCTTTCATTGCTTAAATTCCTGTACTCTGATGAAGTTCATATCGGACCCGAGACAGTGATGACGACTCTCTACACGGCTAAAAAATACGCTGTTCCGGCTCTAGAGGCACACTGTGTGGAGTTTCTGAAGAAGAACCTACGAGCGGATAATGCGTTCATGCTGCTTACACAAGCGAGGCTGTTTGATGAGCCGCAGTTGGCCAGTCTGTGTCTGGAGAACATCGATAAAAACACAGGAGACGCTCTGGCTGCAGAAGGATTCACTGATATTGATCTGGATACGCTGGTGGCAGTGTTGGAGAGAGATACTCTGGGTGTGCGAGAGGTTCATCTGTTCGGAGCAGCGGTCCGCTGGGCAGAAGCTGAAGCTCACCGGCAGCAGCTTCAGCCTACGCCGGAGAACAAGAGACGAGTGCTGGGAAAAGCCCTCAGCCTCATCCGCTTCCCTCTCATGACCATTGAGGAGTTCGCTGCAGGTCCTGCTCAGTCAGCCATTCTCACAGACAGGGAGGTCGTGAGTCTGTTCCTGCACTTCACGGTGAACCCTAAGCCACGTGTGGAGTTTATCGACAGGCCGCGCTGCTGTTTGCGGGGCAAAGAGTGCAGCATCACACGCTTCGGGCAGGTGGAAAGTCGCTGGGGCTACAGCGGGACCAGTGACCGGATCCGGTTCTCTGTCAGCCGCAGGATATTTATTGTGGGCTTTGGGCTTTATGGATCCATACACGGACCTACAGACTATCAGGTCAACATACAGatcATTCACACTGACAGTAACACAGTTCTGGGTCAGAACGACACGGGTTTCAGCTGTGACGGGTCTGCAAACACATTCAGAGTCATGTTTAAGGAGCCAGTGGAGGTTCTGCCCAACGTCAACTACACCGCCTGTGCTACATTAAAGGGTCCAGACTCGCACTACGGCACTAAAGGGATGAGGAAAGTCACTCACGAGTCTTCAGGCTCCGGCACCAAAACCTGCTTCACTTTCTGCTACGCCGCCGGGAACAACAACGGCACATCAGTGGAGGACGGACAGATCCCAGAAGTCATCTTTTACACGTAG

Function

symbol description
btbd2b Predicted to be located in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104653

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033140 False 1770 mRNA 0.55 8 57206248 57227542
TCONS_00033139 True 1695 mRNA 0.55 9 57206248 57227542

Neighbor

gene id symbol gene type direction distance location
XLOC_016976 NA coding downstream 1802 57203011 ~ 57204446 (-)
XLOC_016975 ARMC6 coding downstream 62771 57121596 ~ 57143477 (-)
XLOC_016973 slc25a42 coding downstream 95771 57076079 ~ 57110477 (-)
XLOC_016974 dre-mir-7148 coding downstream 102763 57103401 ~ 57103485 (-)
XLOC_016972 NA coding downstream 144313 57053019 ~ 57061935 (-)
XLOC_016978 mbd3a coding upstream 12436 57239978 ~ 57264334 (-)
XLOC_016979 si:ch1073-325m22.2 coding upstream 41239 57268781 ~ 57287258 (-)
XLOC_016980 tcf3a coding upstream 82981 57310523 ~ 57379216 (-)
XLOC_016981 NA coding upstream 173454 57400996 ~ 57405728 (-)
XLOC_016982 map2k2b coding upstream 189302 57416844 ~ 57443210 (-)
XLOC_016971 NA non-coding downstream 321360 56809292 ~ 56884888 (-)
XLOC_016969 NA non-coding downstream 550479 56642138 ~ 56655769 (-)
XLOC_016983 NA non-coding upstream 206453 57433995 ~ 57434621 (-)
XLOC_016985 NA non-coding upstream 263325 57490867 ~ 57580290 (-)
XLOC_016986 NA non-coding upstream 354129 57581671 ~ 57586197 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location