XLOC_016993 (si:dkeyp-68b7.5)


Basic Information

Item Value
gene id XLOC_016993
gene name si:dkeyp-68b7.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 57925518 ~ 57941863 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033169
tggtttgtgtAAACACTATTGATGCATGCGCGACTATTCACAGGCTCGGCTGAAAGAAAGGAAAACACCGCGCGGAGCTTCTCTGGAGAACACCCAGACTTCCCATCGATAAAACACGATCTCCACCGACATTTAAACGACTAAAATGTCCACATCTGCTGACATCCAGGCGCAGCTGGCGTCGATTATCGAGCGCTTCGCCAAATGCGCGCTGCTGGAGATGAGCCGGGCGGTGGAGCAGGAGATGAGCCGCCGGCAGATGGAGGTCCAGAGTCTGCTGCTGAAGCTCCAGTTCACCGAGAGCGAGCTGCGGTCGGTCCGCCAGAACCAAGCCAATCTGCGCTCCGTGGGAATACAGGTCAACAGCAGCGTACACAGAGATGTAAACCTCAACCTTGTAAAGCTCAATGAAAATCATGATGGAGATGCGCAGGCAAATACACATGTTGATGATCCCTCAGCACAGACATTCCCACAGCATcaAGAAGATGGAATCAAATCCGTTCGGATCAAAGAAGAACACATGGAGGACGAACAGTGGGACGGCGGCCCGATTTCTCCTGCTCTTTGCCCGTTGGGTCCCGAGGTGGAA
>TCONS_00033170
ggcggctctgttGACGCactccttccaatagacaacaacagcgtgggcgacatctaatGCGCAGCTGGCGTCGATTATCGAGCGCTTCGCCAAATGCGCGCTGCTGGAGATGAGCCGGGCGGTGGAGCAGGAGATGAGCCGCCGGCAGATGGAGGTCCAGAGTCTGCTGCTGAAGCTCCAGTTCACCGAGAGCGAGCTGCGGTCGGTCCGCCAGAACCAAGCCAATCTGCGCTCCGTGGGAATACAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-670 No description available

Ensembl:

ensembl_id ENSDARG00000079930

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033169 False 592 mRNA 0.53 4 57925518 57941037
TCONS_00033170 True 247 processed_transcript 0.62 2 57940680 57941863

Neighbor

gene id symbol gene type direction distance location
XLOC_016992 si:dkeyp-68b7.7 coding downstream 7204 57892666 ~ 57918314 (-)
XLOC_016991 TPGS1 coding downstream 34014 57879347 ~ 57891504 (-)
XLOC_016990 sf3a2 coding downstream 87680 57825432 ~ 57837838 (-)
XLOC_016989 NA coding downstream 113704 57801654 ~ 57811814 (-)
XLOC_016988 NA coding downstream 172614 57730336 ~ 57752904 (-)
XLOC_016994 si:dkeyp-68b7.12 coding upstream 11376 57953239 ~ 57991638 (-)
XLOC_016995 nectin4b coding upstream 84633 58026496 ~ 58075414 (-)
XLOC_016996 fcer1gl coding upstream 135799 58077662 ~ 58085444 (-)
XLOC_016997 NA coding upstream 148458 58090321 ~ 58109574 (-)
XLOC_016998 CABZ01110881.1 coding upstream 173260 58115123 ~ 58142854 (-)
XLOC_016986 NA non-coding downstream 339321 57581671 ~ 57586197 (-)
XLOC_016985 NA non-coding downstream 345228 57490867 ~ 57580290 (-)
XLOC_016983 NA non-coding downstream 490897 57433995 ~ 57434621 (-)
XLOC_017001 NA non-coding upstream 270686 58212549 ~ 58213192 (-)
XLOC_017003 AL954696.2 non-coding upstream 330215 58272078 ~ 58340517 (-)
XLOC_017006 NA non-coding upstream 494897 58436760 ~ 58441495 (-)
XLOC_017010 CABZ01081294.1 non-coding upstream 694813 58636676 ~ 58636792 (-)

Expression


Co-expression Network