RNA id: TCONS_00033170


Basic Information

Item Value
RNA id TCONS_00033170
length 247
RNA type processed_transcript
GC content 0.62
exon number 2
gene id XLOC_016993
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 57925518 ~ 57941863 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ggcggctctgttGACGCactccttccaatagacaacaacagcgtgggcgacatctaatGCGCAGCTGGCGTCGATTATCGAGCGCTTCGCCAAATGCGCGCTGCTGGAGATGAGCCGGGCGGTGGAGCAGGAGATGAGCCGCCGGCAGATGGAGGTCCAGAGTCTGCTGCTGAAGCTCCAGTTCACCGAGAGCGAGCTGCGGTCGGTCCGCCAGAACCAAGCCAATCTGCGCTCCGTGGGAATACAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-670 No description available

Ensembl:

ensembl_id ENSDART00000138307

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033163 lncRNA downstream 102862 57830325 ~ 57837818 (-) True XLOC_016990
TCONS_00033162 lncRNA downstream 109539 57828710 ~ 57831141 (-) False XLOC_016990
TCONS_00034010 lncRNA downstream 128866 57801654 ~ 57811814 (-) True XLOC_016989
TCONS_00033430 lncRNA downstream 187776 57730336 ~ 57752904 (-) True XLOC_016988
TCONS_00034009 lncRNA downstream 354483 57581671 ~ 57586197 (-) True XLOC_016986
TCONS_00034011 lncRNA upstream 148458 58090321 ~ 58109158 (-) False XLOC_016997
TCONS_00033431 lncRNA upstream 149356 58091219 ~ 58109574 (-) False XLOC_016997
TCONS_00033432 lncRNA upstream 165311 58107174 ~ 58109574 (-) True XLOC_016997
TCONS_00033433 lncRNA upstream 245031 58186894 ~ 58201176 (-) False XLOC_017000
TCONS_00033434 lncRNA upstream 270686 58212549 ~ 58213192 (-) True XLOC_017001
TCONS_00033168 mRNA downstream 22366 57913490 ~ 57918314 (-) True XLOC_016992
TCONS_00033166 mRNA downstream 24363 57892667 ~ 57916317 (-) False XLOC_016992
TCONS_00033165 mRNA downstream 40243 57892666 ~ 57900437 (-) False XLOC_016992
TCONS_00033167 mRNA downstream 40250 57898920 ~ 57900430 (-) False XLOC_016992
TCONS_00033164 mRNA downstream 49176 57879347 ~ 57891504 (-) True XLOC_016991
TCONS_00033171 mRNA upstream 11376 57953239 ~ 57991041 (-) False XLOC_016994
TCONS_00033172 mRNA upstream 47539 57989402 ~ 57991638 (-) True XLOC_016994
TCONS_00033173 mRNA upstream 84633 58026496 ~ 58075414 (-) True XLOC_016995
TCONS_00033174 mRNA upstream 135799 58077662 ~ 58085444 (-) True XLOC_016996
TCONS_00033175 mRNA upstream 173260 58115123 ~ 58142854 (-) True XLOC_016998
TCONS_00033146 other downstream 653422 57268782 ~ 57287258 (-) False XLOC_016979
TCONS_00033145 other downstream 671522 57268781 ~ 57269158 (-) False XLOC_016979
TCONS_00033137 other downstream 837195 57103401 ~ 57103485 (-) True XLOC_016974
TCONS_00033134 other downstream 878887 57058078 ~ 57061793 (-) True XLOC_016972
TCONS_00033120 other downstream 1898050 56042512 ~ 56042630 (-) True XLOC_016962
TCONS_00033188 other upstream 694813 58636676 ~ 58636792 (-) True XLOC_017010
TCONS_00033190 other upstream 926246 58868109 ~ 58869453 (-) True XLOC_017015
TCONS_00033196 other upstream 1096332 59038195 ~ 59038312 (-) True XLOC_017019
TCONS_00033197 other upstream 1160306 59102169 ~ 59102252 (-) True XLOC_017022
TCONS_00033216 other upstream 1393918 59335781 ~ 59336963 (-) True XLOC_017033

Expression Profile

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