RNA id: TCONS_00033120


Basic Information

Item Value
RNA id TCONS_00033120
length 119
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_016962
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 56042512 ~ 56042630 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

cccgggttggccatatcaccctgcagcccaacacTGATTACTCACTacagctaagcagggctgagcctggtcagaatGTGTATGGGAAACCACCTGGGAAAGCtcggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000166879

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033119 lncRNA downstream 38692 56002892 ~ 56003820 (-) True XLOC_016960
TCONS_00033424 lncRNA downstream 290814 55727674 ~ 55751698 (-) False XLOC_016956
TCONS_00033110 lncRNA downstream 290843 55725568 ~ 55751669 (-) False XLOC_016956
TCONS_00033423 lncRNA downstream 293191 55727674 ~ 55749321 (-) False XLOC_016956
TCONS_00033425 lncRNA downstream 293191 55739818 ~ 55749321 (-) True XLOC_016956
TCONS_00033122 lncRNA upstream 17770 56060400 ~ 56095003 (-) False XLOC_016963
TCONS_00033999 lncRNA upstream 82547 56125177 ~ 56129369 (-) True XLOC_016964
TCONS_00033426 lncRNA upstream 599508 56642138 ~ 56655769 (-) False XLOC_016969
TCONS_00033427 lncRNA upstream 766662 56809292 ~ 56824959 (-) False XLOC_016971
TCONS_00034000 lncRNA upstream 1010389 57053019 ~ 57061935 (-) False XLOC_016972
TCONS_00033118 mRNA downstream 40397 55980227 ~ 56002115 (-) True XLOC_016961
TCONS_00033115 mRNA downstream 138992 55890673 ~ 55903520 (-) False XLOC_016960
TCONS_00033114 mRNA downstream 181161 55833425 ~ 55861351 (-) True XLOC_016959
TCONS_00033113 mRNA downstream 188569 55833425 ~ 55853943 (-) False XLOC_016959
TCONS_00033112 mRNA downstream 245194 55783896 ~ 55797318 (-) True XLOC_016958
TCONS_00033121 mRNA upstream 17770 56060400 ~ 56095275 (-) True XLOC_016963
TCONS_00033123 mRNA upstream 82544 56125174 ~ 56131312 (-) False XLOC_016964
TCONS_00033124 mRNA upstream 296428 56339058 ~ 56348727 (-) True XLOC_016965
TCONS_00033125 mRNA upstream 314022 56356652 ~ 56387041 (-) False XLOC_016966
TCONS_00033126 mRNA upstream 318763 56361393 ~ 56385373 (-) True XLOC_016966
TCONS_00033117 other downstream 38717 55936374 ~ 56003795 (-) False XLOC_016960
TCONS_00033116 other downstream 59811 55893738 ~ 55982701 (-) False XLOC_016960
TCONS_00033108 other downstream 728302 55305089 ~ 55314210 (-) False XLOC_016954
TCONS_00033102 other downstream 1315086 54727306 ~ 54727426 (-) True XLOC_016947
TCONS_00033081 other downstream 4192241 51850157 ~ 51850271 (-) True XLOC_016923
TCONS_00033134 other upstream 1015448 57058078 ~ 57061793 (-) True XLOC_016972
TCONS_00033137 other upstream 1060771 57103401 ~ 57103485 (-) True XLOC_016974
TCONS_00033145 other upstream 1226151 57268781 ~ 57269158 (-) False XLOC_016979
TCONS_00033146 other upstream 1226152 57268782 ~ 57287258 (-) False XLOC_016979
TCONS_00033170 other upstream 1898050 57940680 ~ 57941863 (-) True XLOC_016993