RNA id: TCONS_00033118



Basic Information


Item Value
RNA id TCONS_00033118
length 132
RNA type mRNA
GC content 0.33
exon number 6
gene id XLOC_016961
representative True

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 55980227 ~ 56002115 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


atgtatttaaaaaGAGAAACAGAACGTAAAAACTCAtctattgatGTACAGTACATTAAAGGTATTCAAaacaaaccatcattatacaataacttgccGAGTGAGGTGAAAAGTTCCCTTCTCAACCTGCTC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000188466

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033424 lncRNA downstream 228529 55727674 ~ 55751698 (-) False XLOC_016956
TCONS_00033110 lncRNA downstream 228558 55725568 ~ 55751669 (-) False XLOC_016956
TCONS_00033423 lncRNA downstream 230906 55727674 ~ 55749321 (-) False XLOC_016956
TCONS_00033425 lncRNA downstream 230906 55739818 ~ 55749321 (-) True XLOC_016956
TCONS_00033421 lncRNA downstream 252987 55684668 ~ 55727240 (-) False XLOC_016956
TCONS_00033119 lncRNA upstream 777 56002892 ~ 56003820 (-) True XLOC_016960
TCONS_00033122 lncRNA upstream 58285 56060400 ~ 56095003 (-) False XLOC_016963
TCONS_00033999 lncRNA upstream 123062 56125177 ~ 56129369 (-) True XLOC_016964
TCONS_00033426 lncRNA upstream 640023 56642138 ~ 56655769 (-) False XLOC_016969
TCONS_00033427 lncRNA upstream 807177 56809292 ~ 56824959 (-) False XLOC_016971
TCONS_00033115 mRNA downstream 76707 55890673 ~ 55903520 (-) False XLOC_016960
TCONS_00033114 mRNA downstream 118876 55833425 ~ 55861351 (-) True XLOC_016959
TCONS_00033113 mRNA downstream 126284 55833425 ~ 55853943 (-) False XLOC_016959
TCONS_00033112 mRNA downstream 182909 55783896 ~ 55797318 (-) True XLOC_016958
TCONS_00033111 mRNA downstream 200300 55751966 ~ 55779927 (-) True XLOC_016957
TCONS_00033121 mRNA upstream 58285 56060400 ~ 56095275 (-) True XLOC_016963
TCONS_00033123 mRNA upstream 123059 56125174 ~ 56131312 (-) False XLOC_016964
TCONS_00033124 mRNA upstream 336943 56339058 ~ 56348727 (-) True XLOC_016965
TCONS_00033125 mRNA upstream 354537 56356652 ~ 56387041 (-) False XLOC_016966
TCONS_00033126 mRNA upstream 359278 56361393 ~ 56385373 (-) True XLOC_016966
TCONS_00033108 other downstream 666017 55305089 ~ 55314210 (-) False XLOC_016954
TCONS_00033102 other downstream 1252801 54727306 ~ 54727426 (-) True XLOC_016947
TCONS_00033081 other downstream 4129956 51850157 ~ 51850271 (-) True XLOC_016923
TCONS_00033075 other downstream 4223117 51752075 ~ 51757110 (-) False XLOC_016919
TCONS_00033120 other upstream 40397 56042512 ~ 56042630 (-) True XLOC_016962
TCONS_00033134 other upstream 1055963 57058078 ~ 57061793 (-) True XLOC_016972
TCONS_00033137 other upstream 1101286 57103401 ~ 57103485 (-) True XLOC_016974
TCONS_00033145 other upstream 1266666 57268781 ~ 57269158 (-) False XLOC_016979
TCONS_00033146 other upstream 1266667 57268782 ~ 57287258 (-) False XLOC_016979