RNA id: TCONS_00033188


Basic Information

Item Value
RNA id TCONS_00033188
length 117
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_017010
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 58636676 ~ 58636792 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATCCACCGCCATATCACACTGCAGCGCAGGCGCGGTTACTCACTGAACCTAAGCAGGGCTGGGCCTGGTCagtgcctggatgggagaccagatGGGAAAACTAAGTTGCTTTTGgca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000185721

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00034015 lncRNA downstream 195181 58436760 ~ 58441495 (-) True XLOC_017006
TCONS_00034014 lncRNA downstream 195818 58436760 ~ 58440858 (-) False XLOC_017006
TCONS_00033182 lncRNA downstream 296159 58291571 ~ 58340517 (-) True XLOC_017003
TCONS_00033435 lncRNA downstream 296320 58275713 ~ 58340356 (-) False XLOC_017003
TCONS_00034012 lncRNA downstream 296408 58277362 ~ 58340268 (-) False XLOC_017003
TCONS_00033436 lncRNA upstream 122118 58758910 ~ 58763285 (-) True XLOC_017011
TCONS_00034016 lncRNA upstream 215178 58851970 ~ 58855883 (-) True XLOC_017013
TCONS_00034017 lncRNA upstream 225830 58862622 ~ 58863935 (-) False XLOC_017014
TCONS_00034018 lncRNA upstream 225830 58862622 ~ 58864060 (-) False XLOC_017014
TCONS_00034019 lncRNA upstream 225830 58862622 ~ 58864528 (-) False XLOC_017014
TCONS_00033186 mRNA downstream 55013 58513535 ~ 58581663 (-) True XLOC_017008
TCONS_00033185 mRNA downstream 163904 58444873 ~ 58472772 (-) True XLOC_017007
TCONS_00033184 mRNA downstream 218838 58414598 ~ 58417838 (-) True XLOC_017005
TCONS_00033183 mRNA downstream 261834 58345157 ~ 58374842 (-) True XLOC_017004
TCONS_00033180 mRNA downstream 379052 58256276 ~ 58257624 (-) True XLOC_017002
TCONS_00033189 mRNA upstream 140572 58777364 ~ 58795694 (-) True XLOC_017012
TCONS_00033191 mRNA upstream 250807 58887599 ~ 58902477 (-) False XLOC_017016
TCONS_00033192 mRNA upstream 251926 58888718 ~ 58900077 (-) False XLOC_017016
TCONS_00033193 mRNA upstream 254852 58891644 ~ 58900077 (-) False XLOC_017016
TCONS_00033194 mRNA upstream 260191 58896983 ~ 58902477 (-) True XLOC_017016
TCONS_00033170 other downstream 694813 57940680 ~ 57941863 (-) True XLOC_016993
TCONS_00033146 other downstream 1349418 57268782 ~ 57287258 (-) False XLOC_016979
TCONS_00033145 other downstream 1367518 57268781 ~ 57269158 (-) False XLOC_016979
TCONS_00033137 other downstream 1533191 57103401 ~ 57103485 (-) True XLOC_016974
TCONS_00033134 other downstream 1574883 57058078 ~ 57061793 (-) True XLOC_016972
TCONS_00033190 other upstream 231317 58868109 ~ 58869453 (-) True XLOC_017015
TCONS_00033196 other upstream 401403 59038195 ~ 59038312 (-) True XLOC_017019
TCONS_00033197 other upstream 465377 59102169 ~ 59102252 (-) True XLOC_017022
TCONS_00033216 other upstream 698989 59335781 ~ 59336963 (-) True XLOC_017033
TCONS_00033220 other upstream 745636 59382428 ~ 59390464 (-) True XLOC_017036

Expression Profile

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