XLOC_017007 (APCDD1)


Basic Information

Item Value
gene id XLOC_017007
gene name APCDD1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 58444873 ~ 58472772 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033185
AGCCTCTTGATGCCACATTCATTGTTATCAATTTTATtaagtggcgctgtaggtagtgctgtcgcctcacagccagaaggtcgctggttcgaacctcggctcagttggtgtttctgtgtggagtttgcatgttctccatgcgtttgcATGCTGAAACACCTGCACAGCGGAGCCCGCATCACCGTCCAGATGCCACCTGACATCCAGGGCCACTGGGTGTCCACCAGCTGTGAGGTCCGTCCCGGGCCCGAGTTCATCACACGCTCATATCGTTTCCTCCACAACAGCAGCTTTAGTGCGCTTCAGTTCTACTACAGCGACGTTCACTGCAGCTCCCCGacacacacactgctggtgcGGGGTCGGTTGCGACTGCGTCAGGCCTCCTGGATCGTCCGCGGTGGCACCGAAGCTGACTACCAGATCCAGAGCACACGAGTGGTGTTTCACTCCGAGTCTGCGGCTGCGGCGCTGGGTCTGCAGCTGGAGCGCGGCTGCAGAAGCATCTCCAGGTCCTGGAGGCTGAATATGAGCTATGAGCTGTGGAGTGAAGAGAAAGACAGCGAATGCACAGCGCAGATCAACTTCAGCATGCATGAGCTGCAGCTGCTGCGTCTGGAGAAACAGCATCTGGAGCCAGCGCTGGAGGAACTGTATCTGGGAGACATCCACACCCAGGCGGAGCACAGGCTCACATACAGACCCTCCAGCTACCAGCCCGCACTACACAATGCCAGGAATCATGATGGCCGCTGTCTGGTCTGCCGGATGGTGTCTCGCTCAGACGAGTTTCATCCTCCGGTTCTGCCCGTTCTCCCGGTTCTCCCTGTGGTCCTGCAAGGTCAGTGGGCTTCCCGGCGCTGCGAGGTCCGGCCTGAGGTGCAGTTCCTGACTCGACACTTCATCTTCCACGACAGCAACAGCAGCTGGGAGGGACATTACTATCATTACTCTGATCCGGCCTGCAGACACCCAACCTTCAGCATCACGGCCAGAGGAGCATACAGCAGAGGAGCAGAGTCAGCACGCATCAGCGGAGCTACTGAGTACATCTTCacagtgcaGCAGGTGTGTGTTCTCCCTCTGGATGTGTCGACCGTGTCTCTGCTGAACCTCTCCCCCGGGGCTCAGTGTGGTGTCCGCGGCTCCTGGAGGCTGGGCGAGCAGCAGGACGTGACGGCGACTCAGGGCTGCGCGGCTCTGGGCATCCGGCTGCCGCACACAGAGTTCGAGATCTTCCGCTCGCAGCGGCTGCAGGACGGCCGACTGCTGCTGTTCAACGGCCAGAGACCCAGCGACGGCTCCAGTCCCGACCGGCCCGAGCGCAGACCATCATCCTTCCAGCAGCCGCTCATGCAGTGCACAGAGCAGAGCGTCAGCGGGTTCACGGAGCAGCATCAGCACCAGCTCACCGTTACCATGGTGATGCTGCTGTTCTGgagtctgattggctga

Function

symbol description
apcdd1 Enables Wnt-protein binding activity and identical protein binding activity. Involved in hair follicle development and negative regulation of Wnt signaling pathway. Is integral component of plasma membrane. Implicated in hypotrichosis 1.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098203

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033185 True 1455 mRNA 0.60 5 58444873 58472772

Neighbor

gene id symbol gene type direction distance location
XLOC_017006 NA coding downstream 3378 58436760 ~ 58441495 (-)
XLOC_017005 CU694255.2 coding downstream 27035 58414598 ~ 58417838 (-)
XLOC_017004 AL954696.1 coding downstream 70031 58345157 ~ 58374842 (-)
XLOC_017003 AL954696.2 coding downstream 104356 58272078 ~ 58340517 (-)
XLOC_017002 foxl2b coding downstream 187249 58256276 ~ 58257624 (-)
XLOC_017008 epb41l3b coding upstream 40763 58513535 ~ 58581663 (-)
XLOC_017009 CABZ01081294.2 coding upstream 159058 58631830 ~ 58640644 (-)
XLOC_017010 CABZ01081294.1 coding upstream 163904 58636676 ~ 58636792 (-)
XLOC_017011 NA coding upstream 286138 58758910 ~ 58763285 (-)
XLOC_017012 ptprsa coding upstream 304592 58777364 ~ 58795694 (-)
XLOC_017001 NA non-coding downstream 231681 58212549 ~ 58213192 (-)
XLOC_016997 NA non-coding downstream 335299 58090321 ~ 58109574 (-)
XLOC_016989 NA non-coding downstream 633059 57801654 ~ 57811814 (-)
XLOC_017013 NA non-coding upstream 379198 58851970 ~ 58855883 (-)
XLOC_017014 NA non-coding upstream 389850 58862622 ~ 58865496 (-)
XLOC_017015 fem1a non-coding upstream 395337 58868109 ~ 58869453 (-)

Expression


Co-expression Network