XLOC_017031 (ftr35)


Basic Information

Item Value
gene id XLOC_017031
gene name ftr35
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 59295260 ~ 59303406 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033213
GAAAGTAATAGTCGGTGTTGGGTGTGTTGTGTcggtgtctctgtctgtctgtgtgtgtgagcagtaaaATGGCAGAATCCAGTCTTTCTTTGGCTCATCATTTCAGCTGTTCGGTGTGTCTGGATCTCCTGAAGGATCCAGTCTCCATTCCCTGTGGACACAATTACTGTATGAGCTGCATCACAGACTGCTGGAATCAGGAGGATCAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGCCCCAGACCCGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGCtggagaaactgcagaagagcaaACTACAAGCTGCTGGTCCTGCTCAGAGTCCCGCTGCATCTGGAGATGTGGAGTGTGACGTCTGTACTGGAGCCAAAAACAGAGCCGTCAAGTCCTGTCTGGTGTGTCTGAACTCTTACTGTCACACTCATTTTCAGCGCCATCAAGAAATTCACCCAGGAAATCGACACAAAGTGACTGAAGCCACTCATAAACTGCAGGAGATGATCTGTCCTCAACATGAGAAACCCCTGGAGATCTTCTGCCGCACTGATCACTGCTGTATTTGTTATCTGTGTTTGCTGGATCAACACAAACACCATGACACTGTTTCAGCTGCAGCAGAGAGGACTGAACAAGAGAGTCGGCTGAGGGAAACCCAGAGCAGATTCCAGCAGAGACTCCAGGAGAGACAGAAGGAGCTGGAGGAGCTGAGAGAGGCTGTGGAGTCTCACAAGcgcTCTGCACAGGCCGCAGTGGACCACACCGAGAGGATCTTCACTCAGCTCATCTGCTGGATTGAGAGAAGCCGCTCGGAGCTCACGCAGATGATCAGAGATGGAGAAAAGACTGCAGTGAGTGGAGCTGAAGAACGACTGGAGCGACTGGAGCAGGAGATCAATGATCTGAGGAGGAGAAACGCTGAGCTGGAGCAGCTTTCACACACAGAAGATCACATCCATTTCCTCCAGagtttgcagtCTCTCTCTGTCCCTCCTGGATCTACAGACTCATCCAGCTTTATTAGCAGCTCGCAGCTCGCTTTTGATCAACTTGCTGAATCTGTGTCTCGTCTGAGAGACAAACTGCAGCAGTTCTGCACTGAGGAGATAGAAATGATATCTAGTCGAGTGAGCAGCATTAGCATCATTACCGCTCCTGAACCACAGACCCGTGAGCAGTTCCTCCAGTATTCTCAACAGTTCACTTTGGATCCAAACACAGCGCATAAATATCTGGTTCTGTCTGAAGGAAACACAGCGGTGGAGGATAAAGATTCAGtccagccgtatcctgatcatccagacagatttgatggttGGCGTCAGGTGTTGtgtagagagagtgtgtgtggacgctctTACTGGGAGCTGGAGTGGAGCGGTGATGGTGTGTAtttatcagtgtcatataagagtaTCAGCAGGAAGGGTTCGGGTAATGAGTGTGGATTTGGACACAAtgatcagtcctggagtttgtgcTGCTCTGATTACAGTTTCTCATTCAGGCATAACAATATAAAGACTAAACTCCCTAAACCCTCCGTCAGCTCCTCTAGAATAGGAG
>TCONS_00033214
ATGGCAGAATCCAGTCTTTCTTTGGCTCATCATTTCAGCTGTTCGGTGTGTCTGGATCTCCTGAAGGATCCAGTCTCCATTCCCTGTGGACACAATTACTGTATGAGCTGCATCACAGACTGCTGGAATCAGGAGGATCAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGCCCCAGACCCGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGCtggagaaactgcagaagagcaaACTACAAGCTGCTGGTCCTGCTCAGAGTCCCGCTGCATCTGGAGATGTGGAGTGTGACGTCTGTACTGGAGCCAAAAACAGAGCCGTCAAGTCCTGTCTGGTGTGTCTGAACTCTTACTGTCACACTCATTTTCAGCGCCATCAAGAAATTCACCCAGGAAATCGACACAAAGTGACTGAAGCCACTCATAAACTGCAGGAGATGATCTGTCCTCAACATGAGAAACCCCTGGAGATCTTCTGCCGCACTGATCACTGCTGTATTTGTTATCTGTGTTTGCTGGATCAACACAAACACCATGACACTGTTTCAGCTGCAGCAGAGAGGACTGAACAAGAGAGTCGGCTGAGGGAAACCCAGAGCAGATTCCAGCAGAGACTCCAGGAGAGACAGAAGGAGCTGGAGGAGCTGAGAGAGGCTGTGGAGTCTCACAAGGTGAGTTTGAGCAGAAGAACAGCAGCTGAAGAGACCTTTCACACT

Function

symbol description
ftr35 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-111 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000089388

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033213 False 1584 mRNA 0.49 6 59295260 59303406
TCONS_00033214 True 729 mRNA 0.50 2 59297642 59303338

Neighbor

gene id symbol gene type direction distance location
XLOC_017030 ftr34 coding downstream 9853 59278841 ~ 59285407 (-)
XLOC_017029 ftr33 coding downstream 29723 59255193 ~ 59265537 (-)
XLOC_017028 ftr32 coding downstream 47449 59245240 ~ 59247811 (-)
XLOC_017027 ftr29 coding downstream 64149 59221948 ~ 59231111 (-)
XLOC_017026 ftr30 coding downstream 89819 59190666 ~ 59205441 (-)
XLOC_017032 ftr36 coding upstream 9370 59312776 ~ 59327299 (-)
XLOC_017033 BX537288.1 coding upstream 32375 59335781 ~ 59336963 (-)
XLOC_017034 ftr37 coding upstream 36244 59339650 ~ 59345920 (-)
XLOC_017035 ftr38 coding upstream 64023 59367429 ~ 59376735 (-)
XLOC_017036 NA coding upstream 75760 59379166 ~ 59390464 (-)
XLOC_017022 NA non-coding downstream 174420 59093307 ~ 59120840 (-)
XLOC_017021 NA non-coding downstream 205825 59086464 ~ 59089435 (-)
XLOC_017020 NA non-coding downstream 211646 59075775 ~ 59083614 (-)
XLOC_017019 CU914601.1 non-coding downstream 256948 59038195 ~ 59038312 (-)
XLOC_017018 NA non-coding downstream 369744 58922622 ~ 58925516 (-)

Expression


Co-expression Network