XLOC_017030 (ftr34)


Basic Information

Item Value
gene id XLOC_017030
gene name ftr34
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 59278841 ~ 59285407 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033211
GAAAGTAATAGTCGGTGTTGGGTGTGTTGTGTCggtgtctctctctgtctgtgtttgtgagcAGTAAAATGGCAGAATCCAGTCTTTCTTTGGCTCATCATTTCAGCTGTTCGGTGTGTCTGGATCTCCTGAAGGATCCAGTCTCCATTCCCTGTGGACACAGTTACTGTATGAGCTGCATCACAGACTGCTGGAATCAGGAGGATCAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGCCCCAGACCCGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGCtggagaaactgcagaagagcaaACTACAAGCTGCTGGTCCTGCTCAGAGTCCCGCTGCATCTGGAGATGTGGAGTGTGACGTCTGTACTGGAGCCAAAAACAGAGCCGTCAAGTCCTGTCTGGTGTGTCTGAACTCTTACTGTCACACTCATTTTCAGCGACATCAAGAAATTCACCCAGGAAATCAACACAAAGTGACTGAAGCCACTCATAAACTGCAGGAGATGATCTGTCCTCAACATGAGAAACCCCTGGAGATCTTCTGCCGCACTGATCACTGCTGTATTTGTTATCTGTGTATGGTGGATCAACACAAACACCATGACACTGTTTCAGCTGCTGCAGAGAGGACTGAACAAGAGAGTCGGCTGAGGGAAACCCAGAGCAGATTCCAGCAGAGACTCCAGGAGAGACAGAAGGAGCTGGAGGAGCTGAGAGAGGCTGTGGAGTCTCACAAGcGCTCTGCACAGGCCGCAGTGGACCACACCGAGAGGATCTTCACTCAGCTCATCTGCTGGATTGAGAGAAGCCGCTCGGAGCTCACGCAGATGATCAGAGATGGAGAAAAGACTGCAGTGAGTGGAGCTGAAGAACGACTGGAGCGACTGGAGCAGGAGATCAATGATCTGAGGAGGAGAAACGCTGAGCTGGAGCAGCTTTCACACACAGAAGATCACATCCATTTCCTCCAGagtttgcagtCTCTCTCTGTCCCTCCTGGATCTACAGACTCATCCAGCTTTTTTATCAGCTCACAGCTCTCTTTTGATCAACTTGCTGAATCTGTGTCTCGTCTGAGAGACAAACTGCAGCAGTTCTGCACTGAGGAGATGAAGACCATATCTAGCAGAGTGAGCAGCATTAGCATCATTCCCGCTCCTGAAGCACAGACCCATGAGCAGTTCCTCCAGTATTCTCAACAGTTCACTTTGGATCCAAACACAGCGCATAACAGGCTGGTTCTGTCTGAAGGAAACACAGCGGTGGAAAATAACTGGTCAGtccagccgtatcctgatcatccagacagatttgatggttATTCTCAGGTGTTGtgtagagagagtgtgtgtggacgctctTACTGGGAGCTGGAGTGGAGCGGTAATGGTGTAgaaatatcagtgtcatataagagcatcagcagGAAGGGTTCGGGTAATGAGTGTCTGTTTGGACGCAAtgatcagtcctggagtttgtgcTGCTCTCCTCTCAGTTTATCATTCtatcataataatataaacacTAAACTCCCTAAACCCTCCGTCAGCTCCTCTAGAATAGGAG
>TCONS_00033212
GCCTTTGATTGGTCTCCTGTCACATGAGTTTGCATGTTGCCAAGTCCATCAATTCTTCATTACTGACTAAATAAAGTTGCACTAGAATTTCCTTATTAAATAATCTGCATATATcaatgaattgtttaatttaaatgtcaGAAAATAATCATCTAAAATTCATAAGAGAATTacaagacttttaaaaaatgatataaGCTACTTATTTATTGAGCTGTTGTGGGTTTATTTCTGCAATAGACTGTCCTCTAGTGGCGGAGTTTATTATGACGCACACAGGAAGTGTCAGAGCTGAGAGGAATCGAAAGTTTACTCAAAAACCGAAAGTAATAGTCGGTGTTGGGTGTGTTGTGTCggtgtctctctctgtctgtgtttgtgagcAGTAAAATGGCAGAATCCAGTCTTTCTTTGGCTCATCATTTCAGCTGTTCGGTGTGTCTGGATCTCCTGAAGGATCCAGTCTCCATTCCCTGTGGACACAGTTACTGTATGAGCTGCATCACAGACTGCTGGAATCAGGAGGATCAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGCCCCAGACCCGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGCtggagaaactgcagaagagcaaACTACAAGCTGCTGGTCCTGCTCAGAGTCCCGCTGCATCTGGAGATGTGGAGTGTGACGTCTGTACTGGAGCCAAAAACAGAGCCGTCAAGTCCTGTCTGGTGTGTCTGAACTCTTACTGTCACACTCATTTTCAGCGACATCAAGAAATTCACCCAGGAAATCAACACAAAGTGACTGAAGCCACTCATAAACTGCAGGAGATGATCTGTCCTCAACATGAGAAACCCCTGGAGATCTTCTGCCGCACTGATCACTGCTGTATTTGTTATCTGTGTATGGTGGATCAACACAAACACCATGACACTGTTTCAGCTGCTGCAGAGAGGACTGAACAAGAGAGTCGGCTGAGGGAAACCCAGAGCAGATTCCAGCAGAGACTCCAGGAGAGACAGAAGGAGCTGGAGGAGCTGAGAGAGGCTGTGGAGTCTCACAAGGTGAGTTTGAGCAGAAGAACAGCAGCTGAAGAGGCCTTTCACACTCcaatgcttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgacagcGCTCTGCACAGGCCGCAGTGGACCACACCGAGAGGATCTTCACTCAGCTCATCTGCTGGATTGAGAGAAGCCGCTCGGAGCTCACGCAGATGA

Function

symbol description
ftr34 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-110 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000079614

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033211 False 1584 mRNA 0.49 6 59278841 59285085
TCONS_00033212 True 1335 mRNA 0.46 2 59281068 59285407

Neighbor

gene id symbol gene type direction distance location
XLOC_017029 ftr33 coding downstream 13304 59255193 ~ 59265537 (-)
XLOC_017028 ftr32 coding downstream 31030 59245240 ~ 59247811 (-)
XLOC_017027 ftr29 coding downstream 47730 59221948 ~ 59231111 (-)
XLOC_017026 ftr30 coding downstream 73400 59190666 ~ 59205441 (-)
XLOC_017025 ftr95 coding downstream 100040 59174872 ~ 59178801 (-)
XLOC_017031 ftr35 coding upstream 9853 59295260 ~ 59303406 (-)
XLOC_017032 ftr36 coding upstream 27369 59312776 ~ 59327299 (-)
XLOC_017033 BX537288.1 coding upstream 50374 59335781 ~ 59336963 (-)
XLOC_017034 ftr37 coding upstream 54243 59339650 ~ 59345920 (-)
XLOC_017035 ftr38 coding upstream 82022 59367429 ~ 59376735 (-)
XLOC_017022 NA non-coding downstream 158001 59093307 ~ 59120840 (-)
XLOC_017021 NA non-coding downstream 189406 59086464 ~ 59089435 (-)
XLOC_017020 NA non-coding downstream 195227 59075775 ~ 59083614 (-)
XLOC_017019 CU914601.1 non-coding downstream 240529 59038195 ~ 59038312 (-)
XLOC_017018 NA non-coding downstream 353325 58922622 ~ 58925516 (-)
XLOC_017036 NA non-coding upstream 93759 59379166 ~ 59390464 (-)

Expression


Co-expression Network