RNA id: TCONS_00033212


Basic Information

Item Value
RNA id TCONS_00033212
length 1335
RNA type mRNA
GC content 0.46
exon number 2
gene id XLOC_017030
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 59278841 ~ 59285407 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCTTTGATTGGTCTCCTGTCACATGAGTTTGCATGTTGCCAAGTCCATCAATTCTTCATTACTGACTAAATAAAGTTGCACTAGAATTTCCTTATTAAATAATCTGCATATATcaatgaattgtttaatttaaatgtcaGAAAATAATCATCTAAAATTCATAAGAGAATTacaagacttttaaaaaatgatataaGCTACTTATTTATTGAGCTGTTGTGGGTTTATTTCTGCAATAGACTGTCCTCTAGTGGCGGAGTTTATTATGACGCACACAGGAAGTGTCAGAGCTGAGAGGAATCGAAAGTTTACTCAAAAACCGAAAGTAATAGTCGGTGTTGGGTGTGTTGTGTCggtgtctctctctgtctgtgtttgtgagcAGTAAAATGGCAGAATCCAGTCTTTCTTTGGCTCATCATTTCAGCTGTTCGGTGTGTCTGGATCTCCTGAAGGATCCAGTCTCCATTCCCTGTGGACACAGTTACTGTATGAGCTGCATCACAGACTGCTGGAATCAGGAGGATCAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGCCCCAGACCCGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGCtggagaaactgcagaagagcaaACTACAAGCTGCTGGTCCTGCTCAGAGTCCCGCTGCATCTGGAGATGTGGAGTGTGACGTCTGTACTGGAGCCAAAAACAGAGCCGTCAAGTCCTGTCTGGTGTGTCTGAACTCTTACTGTCACACTCATTTTCAGCGACATCAAGAAATTCACCCAGGAAATCAACACAAAGTGACTGAAGCCACTCATAAACTGCAGGAGATGATCTGTCCTCAACATGAGAAACCCCTGGAGATCTTCTGCCGCACTGATCACTGCTGTATTTGTTATCTGTGTATGGTGGATCAACACAAACACCATGACACTGTTTCAGCTGCTGCAGAGAGGACTGAACAAGAGAGTCGGCTGAGGGAAACCCAGAGCAGATTCCAGCAGAGACTCCAGGAGAGACAGAAGGAGCTGGAGGAGCTGAGAGAGGCTGTGGAGTCTCACAAGGTGAGTTTGAGCAGAAGAACAGCAGCTGAAGAGGCCTTTCACACTCcaatgcttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgacagcGCTCTGCACAGGCCGCAGTGGACCACACCGAGAGGATCTTCACTCAGCTCATCTGCTGGATTGAGAGAAGCCGCTCGGAGCTCACGCAGATGA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-110 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDART00000181616

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00034026 lncRNA downstream 160228 59093307 ~ 59120840 (-) False XLOC_017022
TCONS_00033439 lncRNA downstream 164094 59094437 ~ 59116974 (-) False XLOC_017022
TCONS_00034025 lncRNA downstream 164196 59093307 ~ 59116872 (-) False XLOC_017022
TCONS_00034024 lncRNA downstream 177098 59093307 ~ 59103970 (-) False XLOC_017022
TCONS_00034023 lncRNA downstream 178901 59093307 ~ 59102167 (-) False XLOC_017022
TCONS_00034027 lncRNA upstream 93759 59379166 ~ 59390269 (-) False XLOC_017036
TCONS_00034029 lncRNA upstream 93759 59379166 ~ 59390464 (-) False XLOC_017036
TCONS_00034028 lncRNA upstream 93759 59379166 ~ 59390464 (-) False XLOC_017036
TCONS_00033210 mRNA downstream 15531 59263107 ~ 59265537 (-) True XLOC_017029
TCONS_00033209 mRNA downstream 15547 59255193 ~ 59265521 (-) False XLOC_017029
TCONS_00033208 mRNA downstream 33257 59245240 ~ 59247811 (-) True XLOC_017028
TCONS_00033207 mRNA downstream 49957 59227546 ~ 59231111 (-) True XLOC_017027
TCONS_00033206 mRNA downstream 50051 59221948 ~ 59231017 (-) False XLOC_017027
TCONS_00033213 mRNA upstream 9853 59295260 ~ 59303406 (-) False XLOC_017031
TCONS_00033214 mRNA upstream 12235 59297642 ~ 59303338 (-) True XLOC_017031
TCONS_00033215 mRNA upstream 27369 59312776 ~ 59327299 (-) True XLOC_017032
TCONS_00033217 mRNA upstream 54243 59339650 ~ 59345920 (-) True XLOC_017034
TCONS_00033218 mRNA upstream 82022 59367429 ~ 59376399 (-) False XLOC_017035
TCONS_00033197 other downstream 178816 59102169 ~ 59102252 (-) True XLOC_017022
TCONS_00033196 other downstream 242756 59038195 ~ 59038312 (-) True XLOC_017019
TCONS_00033190 other downstream 411615 58868109 ~ 58869453 (-) True XLOC_017015
TCONS_00033188 other downstream 644276 58636676 ~ 58636792 (-) True XLOC_017010
TCONS_00033170 other downstream 1339205 57940680 ~ 57941863 (-) True XLOC_016993
TCONS_00033216 other upstream 50374 59335781 ~ 59336963 (-) True XLOC_017033
TCONS_00033220 other upstream 97021 59382428 ~ 59390464 (-) True XLOC_017036

Expression Profile

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