RNA id: TCONS_00033208


Basic Information

Item Value
RNA id TCONS_00033208
length 928
RNA type mRNA
GC content 0.50
exon number 5
gene id XLOC_017028
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 59245240 ~ 59247811 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGTCGGCTGAGGGAAACCCAGAGCAAATTCCAGCAGAGACTCCAGGAGAGACAGAAGGAGCTGGAGGAGCTGAGAGAGGCTGTGGAGTCTCACAAGcGCTCTGCAAAGGCCGCAGTGGACCACACCGAGAGGATCTTCACTCAGCTCATCTGCTGGATTGAGAGAAGCCGCTCGGAGCTCACGCAGATGATCAGAGATGGAGAAAAGACTGCAGTGAGTGGAGCTGAAGAACGACTGGAGCGACTGGAGCAGGAGATCAATGATCTGAGGGGGAGAAACGCTGAGCTGGAGCAGCTTTCACACACAGAAGATCACATCCATTTCCTCCAGagtttgcagtCTCTCTCTGTCCCTCCTGGATCTACAGACTCATCCAGCTTTATTAGCAGCTCGCAGCTCGCTTTTGATCAACTTGCTGAATCTGTGTCTCGTCTGAGAGACAAACTGCAGCAGTTCTGCACTGAGGAGATAGAAATGATATCTAGTCGAGTGAGAACCATTAGCACTATTCCCACTCCTCAACCACAGACCCGTGAGCAGTTCCTCCAGTATTCTCAACAGTTCACTTTGGATCCAAACACAGCGCATAACAGGCTGGTTCTGTCTGAAGGAAACACAGCGGTGGAATATAAACGTTCAGtccagccgtatcctgatcatccagacagatttgatgtttGGCCTCAGGTGTTGtgtagagagagtgtgtgtggacgctctTACTGGGAGCTGGAGTGGAGCAGAGCAAGTGTGttaatatcagtgtcatataagagcatcagcagGAAGGGTTCGGGTAATGAGTGTGGATTTGGACGCAAtgatcagtcctggagtttggAGTACTCTTCTCACAGTTTCTCATTCTATCATAATAACATAAAGACTGATCTCCCTAAACCCTCCGTCAGCTCCTCTAGAATAGGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000141384

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00034026 lncRNA downstream 124400 59093307 ~ 59120840 (-) False XLOC_017022
TCONS_00033439 lncRNA downstream 128266 59094437 ~ 59116974 (-) False XLOC_017022
TCONS_00034025 lncRNA downstream 128368 59093307 ~ 59116872 (-) False XLOC_017022
TCONS_00034024 lncRNA downstream 141270 59093307 ~ 59103970 (-) False XLOC_017022
TCONS_00034023 lncRNA downstream 143073 59093307 ~ 59102167 (-) False XLOC_017022
TCONS_00034027 lncRNA upstream 131355 59379166 ~ 59390269 (-) False XLOC_017036
TCONS_00034029 lncRNA upstream 131355 59379166 ~ 59390464 (-) False XLOC_017036
TCONS_00034028 lncRNA upstream 131355 59379166 ~ 59390464 (-) False XLOC_017036
TCONS_00033207 mRNA downstream 14129 59227546 ~ 59231111 (-) True XLOC_017027
TCONS_00033206 mRNA downstream 14223 59221948 ~ 59231017 (-) False XLOC_017027
TCONS_00033203 mRNA downstream 39799 59190666 ~ 59205441 (-) False XLOC_017026
TCONS_00033204 mRNA downstream 39847 59202755 ~ 59205393 (-) False XLOC_017026
TCONS_00033205 mRNA downstream 39847 59204086 ~ 59205393 (-) True XLOC_017026
TCONS_00033209 mRNA upstream 7382 59255193 ~ 59265521 (-) False XLOC_017029
TCONS_00033210 mRNA upstream 15296 59263107 ~ 59265537 (-) True XLOC_017029
TCONS_00033211 mRNA upstream 31030 59278841 ~ 59285085 (-) False XLOC_017030
TCONS_00033212 mRNA upstream 33257 59281068 ~ 59285407 (-) True XLOC_017030
TCONS_00033213 mRNA upstream 47449 59295260 ~ 59303406 (-) False XLOC_017031
TCONS_00033197 other downstream 142988 59102169 ~ 59102252 (-) True XLOC_017022
TCONS_00033196 other downstream 206928 59038195 ~ 59038312 (-) True XLOC_017019
TCONS_00033190 other downstream 375787 58868109 ~ 58869453 (-) True XLOC_017015
TCONS_00033188 other downstream 608448 58636676 ~ 58636792 (-) True XLOC_017010
TCONS_00033170 other downstream 1303377 57940680 ~ 57941863 (-) True XLOC_016993
TCONS_00033216 other upstream 87970 59335781 ~ 59336963 (-) True XLOC_017033
TCONS_00033220 other upstream 134617 59382428 ~ 59390464 (-) True XLOC_017036

Expression Profile

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