XLOC_017133 (si:dkeyp-51f12.2)


Basic Information

Item Value
gene id XLOC_017133
gene name si:dkeyp-51f12.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 7180298 ~ 7192454 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034175
CGCTCACTCGAGCGCGCGGACTGAACCTGATGCGCGTAAACAGCAACTCGACCGAGCGCAGCCGGTGTTACATCTCTGTAACGCACTTTATGTTCGTCTCTTTTTTACTGCAATTGCCTGAACCAAGACTTAAGAAAGAATAATATGTATTCGCAGTCATATAATGCGCACAGAATTTGCAATTTCCTCAAGAAGTGAACCAATGCATCTCCGTTTGAGGAACTTGATTCGCCCTGGAATCTTAATGTCATCGTGAAGCAGAGCGATGCCGAAGGAACTTTCCAGATAGATCAATGATATGAACTTACAGTATGCCTTCGTTACACCATGGCGCTATTTTCATTGGAGTATTTTTGATAGTCACCGGTGGCTCCACCGCGTTTCTAACTTCTAACCAAAGTCGCCTGCAGGCGTTCAGCATGTGCTGCGTGGTGCTCGGGGCGGTCATGCTCATATTAGGACTTTTCTGGGCGATGAACGGCAAGAGAAACCCGGTGCCTTATAATGAAGAGTACAGTCACGACTACAGCCAGGTCCTGTTCACCCCACCGCCCGGAAACCACTTCCCCGAGTCACAGTCCGTCTTTCTGCACGGGACTTTGCAAAGACGAGGTGTATACGGTGAAGATTTGGACTATCCACCAATGGAGCCAACGTGTTTCAGTCCTACCAGTCGTGTCCGGCCGCCTCACTGGGACTTGGAGCCTCCTCCGCCATATGAAGTGGCCATCAAAACCACCAGGAGCTCCACACAGCTGAGACGCAGCTTCTCAGACACGCACCTCCTCACTGAGCCTCTGTTTGGACGCTCAAGGGAGATCAGTTTCGAAGTGTGATATCTAGACCATGTGCATCTCAAAATAAGGAGCGGAACACAGCCTGAAATATTCAATGAGAAGTGCAAAACAGGCATTGACAATCCACAGCTTGTCCAGGACAGGCATTCTTGAGATGATTCTTGAGTCTTAATTCTGTGTTTACAGCATTATGTAGACAGAAATGTTGAATTCTACACTTTTTTTCCCCAAGTAAAATGAACTCTAAATCTAAAACCTGTACATGGAAGCTGAAGCTGATGAAAGTAAGTGTTTAATCTCTCAATAAACAATCTAATGCAGgaggtt

Function

symbol description
si:dkeyp-51f12.2 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-546 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000095606

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034175 True 1124 mRNA 0.47 2 7180298 7192454

Neighbor

gene id symbol gene type direction distance location
XLOC_017132 ftr85 coding upstream 75661 7084154 ~ 7104637 (+)
XLOC_017131 CR788301.1 coding upstream 260434 6919748 ~ 6919864 (+)
XLOC_017130 igfbp3 coding upstream 376061 6756247 ~ 6804237 (+)
XLOC_017129 tns3.2 coding upstream 513657 6590220 ~ 6666641 (+)
XLOC_017128 tns3.1 coding upstream 603489 6543674 ~ 6576809 (+)
XLOC_017134 si:dkeyp-51f12.3 coding downstream 17518 7209972 ~ 7229267 (+)
XLOC_017135 bsnd coding downstream 51425 7243879 ~ 7251770 (+)
XLOC_017136 NA coding downstream 135037 7327491 ~ 7351711 (+)
XLOC_017137 FO834840.1 coding downstream 148624 7341078 ~ 7341194 (+)
XLOC_017138 pcsk9 coding downstream 205636 7398090 ~ 7432867 (+)
XLOC_017125 CABZ01086587.1 non-coding upstream 844887 6335296 ~ 6335411 (+)
XLOC_017124 NA non-coding upstream 965509 6212810 ~ 6214789 (+)
XLOC_017119 CU571247.1 non-coding upstream 1756202 5423962 ~ 5424096 (+)
XLOC_017116 dre-mir-7146 non-coding upstream 2105244 5074924 ~ 5075054 (+)
XLOC_017139 NA non-coding downstream 341262 7533716 ~ 7540142 (+)
XLOC_017142 NA non-coding downstream 709502 7901956 ~ 7902288 (+)
XLOC_017144 NA non-coding downstream 878870 8071324 ~ 8077719 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000051_01945810_01948306 NA coding CI01000051 null 1945810 ~ 1948486 (+)