XLOC_017621 (taar11)


Basic Information

Item Value
gene id XLOC_017621
gene name taar11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 46131812 ~ 46132911 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034950
CGACCTAATCTCCGAATCTCAGAATGTAATGTTTACATGTAAAGCCTAATCAATCTGTTGTCTCGTTCTAGGTACTGAACTGCCTGTATGATGAATCAGAGTCATCAGTGGTCTGCAGAGACGTTCAGCCTCTGTTTTGAATCCATAAATGACTCCTGCGTTAAGACAGTCTATTCTCCGGTGTTCCGTGCTCCTCTATACCTCCTCTTTATTATTGCTATCATTCTGATAGTGTTTGGTAACCTGTGGGTCATCTGCACCATCTCCTTTTTCCAGCAGCTCCACACACCCACCAACTACCTGATCCTCTCAATGGCCGTATCGGATCTGCTTCTGGGCAGTTTTGTCATGCCCCCGAGTATGTTGCGCTCTTTGGAAACGTGCTGGTACTTTGGTGACTTTTTCTGCAAGTTTCACTCTGCTACTGACTTTACACTGTGCAATGCATCTGTTTTACACCTCGTGTTCATCTCGATCGACCGATATTATGCAGTTTGCCAACCGTTTCACTATCAGAGCAGAATGACCACACGTGTGAGCGTATTCATGATCCTGATCAGCTGGAGTTTCTCTGCCTTTTTCGGCTTCGGTATTATATTCTCAGAGCTGAAAATCGAAAAAAAAAGAACCGAGGAGTTGCATGTTGCTTGTAAAGGAGGATGTTTAGCATTGCACGGCCGAGAAATCGGAGTAACGTATTCGCTTGTGTTTTATTTCCTCCCCATGTTTATAATTGTCAGCCTGTACAGCAGGGTTTTCATTATAGCACTCAAACATGTCCGTGTTATAAATAGCGCCGCAAGCTCATTATCAGCTACTAAAATGGATTTGAAAGCCACTAAAACGCTTGCTATCATCATTGGAGTTTTCATGTCTTGTTGGACGCCTTATTTCATGTGCAACATCATCGATCCTATTGTCAACCATACAATACCGGCTCTGCTGTATGAGGTTCTGATGTGGGTGGCTTATCTGAACGCAGTGTTCAACCCCTTGGTTTATGCCTTTTTTTACAGCTGGTTCAGAGATAAATCCAAACTTTtgttggagaaattgtataaatTGTGCTAAATCTGTAGGCCAATCTGCTCTCTGCTTAA

Function

symbol description
taar11 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-52 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000022938

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034950 True 1100 mRNA 0.43 1 46131812 46132911

Neighbor

gene id symbol gene type direction distance location
XLOC_017620 si:dkey-7c18.24 coding upstream 88407 46039591 ~ 46043405 (+)
XLOC_017619 NA coding upstream 135380 45987917 ~ 45996432 (+)
XLOC_017618 AL929237.2 coding upstream 145029 45985461 ~ 45986783 (+)
XLOC_017617 NA coding upstream 229655 45900148 ~ 45902157 (+)
XLOC_017615 bmp2b coding upstream 232663 45893173 ~ 45899149 (+)
XLOC_017622 taar13e coding downstream 39738 46172649 ~ 46173674 (+)
XLOC_017623 taar13a coding downstream 43654 46176565 ~ 46177592 (+)
XLOC_017624 taar13b coding downstream 50594 46183505 ~ 46184530 (+)
XLOC_017625 taar13d coding downstream 58719 46191630 ~ 46192655 (+)
XLOC_017626 taar13c coding downstream 69277 46202188 ~ 46203215 (+)
XLOC_017616 NA non-coding upstream 235272 45894168 ~ 45896540 (+)
XLOC_017613 NA non-coding upstream 289987 45836898 ~ 45841825 (+)
XLOC_017637 BX957286.1 non-coding downstream 144995 46277906 ~ 46279478 (+)
XLOC_017642 NA non-coding downstream 219002 46351913 ~ 46357028 (+)
XLOC_017643 NA non-coding downstream 229540 46362451 ~ 46367708 (+)
XLOC_017644 NA non-coding downstream 235535 46368446 ~ 46423475 (+)
XLOC_017646 NA non-coding downstream 309635 46442546 ~ 46523077 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000029_05232703_05233677 TAAR11 coding CI01000029 null 5230192 ~ 5234070 (+)