XLOC_017713 (im:7140055)


Basic Information

Item Value
gene id XLOC_017713
gene name im:7140055
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 51061695 ~ 51077936 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035056
CAGAGTCTGCGCacatgtgctgctgctgctgcgccTGAGCCCGGTCTGAGGAGGGTCGCCTTCTCCGCCTTTTTGTCTGCAAGAAATGGCATCGGCGGAGGATGTCGGAGCGAAAAGGCAAATGTTTTATGAAATCGAGTGTGTAATAGACGACTGCGATGCTGATGTTGAATATAAACCCCTGTCAGACAGCGACGAGTTCGACGAGGAGGAGGAACCGCGCGAAGAAGATATTGATTCTTCTGAAGAATGGGAGCCTCTCATGCAGtcaaaactaaagaaaaatgcATCCCCGTCATCATCATCTTTACCACGACGAAGAGGACGACCACGTAAAAACGTTTCTAATCCACCGCCAGCAGCACCAGCACCAGCAGTGAAACCAGTGATTTTGCCTAGAATCGCACCAGCTCCCCCTGGCATGAAGAGTAGGCGAGGCAGACCTCCTAAAGACAAATCCAAAGTCAAACTCCTTCAAAAACCCACCCTGTATCCCATGATCGTGCCCAAACCTCCTGTGTTTGCAACTTTGATCCCTAATACTTCAGCGCAGAACCTTAAACTTGGGCCTAATTCCACATCCACCATTACACTCGGCCCTGATTTCAGTCCTTTAACTCTTTCCAGTCCCGCATCCTCCGTTAATTTGAATCCCAATTCTGCACCCATACTCATCCCGAATTCCACATCTGCTTTTAATCTCAGCCTGAATTCTGCTACATCCGATTCGAATTCGCAATCGCTTGCCACGCTCTTCTGTACAACTACATCGACGAAGATTCTGGTAGACGGAGACTCCAGAGAGAGCAAAGCCGAAGAGCAGACGAGTGTGAATGCAACTGATGAAGAAAGCCCTGCTCCAAAGGACGAAAACCCAGAATTCTCAGAATCTCCCAATGCAAAGAGGCAACGACTCTCAATAGCATTTCTTCCATTGGCCAATGCACAGCAGACAGGCGCACCCTTAAATCACATTTCACAACCTGCTTCTGATCATGCACCTGCTTCTGAATCTTCCCCCGAGCTCAGTTTTCAACCTTCTCCAACAACCATGGATGATCAGTTGACCTCAATATTTGGCTCTGATCACAAGCCTGAGGCCGACAGTGACCTTGATGGAGACACTGACAGGACCAGTGATTCAGAGAAGGAGGACGAGCTGTGGGAAGATGAGTGAGTAagggagtttttttttgtttctgactAGCGTTTACATGACCTCCTGATGTCCCAAACCgagattagattttttaaaagttgaacTTGTTTCAACTTCTGACTTTTTGAAGGCTGGGTCATGCGAAATGCTGCAGAAAGACTGTGACAAACATCCCTAATGTGCaagtttttcttaaaaaaacatcATGGAAAAGGACCACAATAAAATGTAGAGACATATTGTGTGTGATGGGCCCCTTATCTGTTTTTAATGCAATGTAACATTCTATACAATGGAAATATTGTTtcacagttatttaaaatgacaatcgAAATCTTAAATCGTACTCAAGATTGGATGGTTCAtgaaataatgacatttttaaccTTACAAAGCTTTCTGTCATCACATTTGATATGCAACTTTAATAATGTCTAAATTACCACAAAACCTTTGCTTTAAAAAGCTGTTGTAAACGATCGACGGTATGCTGGcgcaaataaaatgcattttaacataactgtagaaatatatattttaagaatgTGGTTCAATGATTGatcattttaaactttaattatcctttttttgtgtgtgtttcaaatATGGTACAAAAGGCTTGAGAAAGAATTGTGTTCAACATTGtgttgtattgtttgttttgccCCTACAGTACAAACATAAGAGATTTGGTCATGAACTATAAGTTCTTCTTACTTTTTGACCATTTTAAATAAGAGTATTTGGACCAGATGAAATCTTTTTGCTCAGTTAAGGCATctgaataaaatgtaatatttttttcttctcaaaTGTGGAAAGTTTTATGTTGTCATTATATCCTTTTATTTAAGGGGATTCAAAGTCGAAGATTTTGTGGAGTCACTTAACAGCATTCTTAAGGGTGCCTCTCACCCCATTATATAGACATaagtatataataaaatatatacgtAGATTCTTAAATAAAGCTATGAAATTTAGAAAATTCAAGTGTAGTGAATGTTTTTTGTTGTCTTATATGAGGCTATGATGAGATCTTATGCAcaacaaactgttttttttttttttctttaatgatgCTATACGACATTGTGTTTTAGTAAAAACTCTTGATTTTTGACCCATGAACAGCAACCATTGTACCAGAATTATCCACAAACGAAAGGTTGGCTTACAGTTTGTTTTATGTGTGTTCTGTTACAGTTTTGATTTTGGTGAAGATCGGAACTGGAAAGTCCAGACCATTTAAAATCACCTGTATCAGCTCAGTCACCTAGGGGTGGCAATCATCCGTCACCTACTTCATCACAAGGCAAACTCTTCATATCCACCTCCAAATCACCTCATGAAGTCACTCCCACACCCACCTTTAAAGCCAGTACCATTCAACCTATATCTAAAGCTACTCCCGCTTCTGAAACTACCCCTAAAATTACTCTAAAGCCACTACTATTCAACCTACCTCTCGAGCTACTTCGATTTTCGAACTCACCCCAAAATCCACTCCCACTCACCTCACTCCTGACGCCACTCTGTCATCCATAATTCCTCTCCTCAAACAACACTCTTACCCAGTCCAGTTGCTACCTTACAAAAAAGGAGAGGTCGGCCCCATAAGAGTTCTTTACCATCAAATCCTAAACCAATTCCTTAACCTACCCCTACTACCATTCCTTTTTCAAAGCTGACTCCCAATCCCACTTTCTTCAGCAAATTAGAACTCTGTTCAGAACCAGCACCCAGCTCTAGAGACATCCCTCAGCCCACTTCTAACTCTGAAGCTACACCAACTCAACCCACCCCTGAATGCACACGCTCTACCATCCAAAATTTCACTTCTAAAGCCACACTCATACTTAGTCCAGTACCCACCTTACAAAGACGGAGACATCGGCCCCATAAGAGTTATTTACCATCCAATCCTAAATCAATCACTTAGCCCACTCCCACCACCATTTCTTGTTCAAAGCTGACTGCTGATATTAGCCCCATAGCCATCTCAATTTTTTACTTTGATCCCACTGTAAAGTCATATTTGAAGCTGCTCCTAATCCCAGTTTCTTCACCAAATTAGAACCTGGGTCAGAACCAACATCCAGCCCTGGAGCCATCCCTCAGCCCACTTCTAATTCTGAAGCTACTTTCATTCAGCCCACCTCTGAATCCACTCTCATATCTACCACTGAAACCACACCCAATCAACCCACCCATGAAGCCTCTCCCTCTATTGTCCATTACTCCACTCCACAAACCAAAATCATACCCAGTCCAGATTTCACCCTACCAAGACAGAGAGGTCGACCCTGTTGGAGTTCTTTACCATTCAAACCTAACCAGTCCCTAAACTCACTCCTATCGCAATTCCTTGTTCAAAGATAACTGCTGATTTTAGCCCCATAGTCATCTCCAATTTCCCTTCCGATCTCACCCTAAATCGTATTTAATGCCTGCTCCCAATCCTACATTGTTAACCAAATTAGAACCTGAGTCAGAACCAACATCCAGGTCTGGAGTCACTCCTCAGCCCACTTCTGCAGAAGAGAAATCAAAGCCCATCACAACTTATTCTTTAAGGCATACCAGAACCAAGGAATCTTTTCACCTTGGTCAGAAGTTGGGGGCAAACCAGATAAATGGCTTGACTTGAGTACTAAAGATGGGAAACCAGTACTTCACAGGATCTCTCCCAAATGAACTCCAGGTCCATAGTTTTTGAATGACCTAATTTATACTGCCTTAAAGTTTTCCACCACCTCTGCCATCAAGACATTTATCCGCAACACCAATAGCAATGCTGAAAGGAGGACAAAAGTAAGAATGTTTCGCTGAGTACCTCTAACCATTGCTAAATTCAACTCCTATGTGGCGCTGGTTGTCTACATGGGTCTAGTGAAAACTAAGTCCATCGTGGACTACTGGACAAAAAAGCCAATGTACAGTTTCTCCTACCCTCAATCCATCATGTCCCAGGCATGGTTTCAGGCGATCTCCTGAAATCTGAACCTCTGTGATCTTGACGAAGATAAGGAGAATGGCTAGACGAAATGCACACCAATTGTTTAAAATCAAGCTTCTTTATGGTGACCTTCTTTCAGCGTGTAAGAAACACTTTCACCCCAACAGAGAGATCACAGTGGATGAGAGAATGGTTGCAACCATGGCTAGGATTGGACTCGAGCGATAGAACTATTGACCAACTACATTGGGATGCAGACTTTGTTCTTAATAATTCATCCTGTAGGTACCCATGGAATTTCTTTGTGCATGATGGAAAGAGTTCAGCTTCTTCAGGTAAAGGTGTAGGGTACACTTCTGTAATAAGACTACTTGATGGCAATGTCCTTGGCGAAGGTTATACGCTGACAACATCTATACCAGTCCGACTCTTTTCTCAGAAATGTTGAAGAACAGCATCTTTGCTTGGGGAACTTTGAGTCATAACTCCAATTTATCGAAGGTCAATGACTTAGGTGAAAGATCAGAAAGAGGATCCATTCGGTGGTCTCGAAAAGGTCCACTTCTGTTTGTAAAGTGAAGGGATGCGAGAGAAGTGCTTATGTGTTCCACAATTCACAAAGCATTCCCGTATAATAGTGTCAGCAGACATACCTAAGATGAAGATGGTGTGTGGAAAACATGCGCAAATACAGCAAATATATATGGATGCGGTTGATCTCTCGAATTCCTTTATAgagttttataatgtttttaagacCACAAAATGGTACAAGATGATCCTCTACCATTTTCTTGACATTGCAGTGGTTTAGTTTCATACTTAACCAACAATTGGTGAAAGCCCAAAAAAAGATGCCCATCTTTCACAAAAAGTTCAGGGAAACACTTCGAGTTCGTAAGTGCTGGAAGAGACAGAAACCCTGTGTTCAAAGATCCCTTGACATCTGCTTCCAAAGAGTCTATTGACAATTCGGCACACATGCCTTTCTTCCCGAATGCATATTCGCCCTCCAACACAGAGTCTCCTCCTCCTGACTTGTCCATTCGAACAAAAGAATGCTCTCCAGAGTATTATGGAGCAGATGCAACGAATGGGAGAAAATTTGTGTCGTGCAAAttggaaacaaaaacaaaactccctTATTCTGCTCCTACTGCAAGATAGCGCTGTTTCGTGTCATTGTATAATTGCTTCAAGAAATGGCACCAAGGCGCAACCCCATGAGAtgtgtgaatattttttatatttcgtATTTTATGACCTTTTTACTTTGTATGCGTTTGTTACTTGTATGGTTATGACCACATTAAATATCTTTAAACAgt

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041111-101 No description available

Ensembl:

ensembl_id ENSDARG00000092181

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035056 True 5446 mRNA 0.42 3 51061695 51077936

Neighbor

gene id symbol gene type direction distance location
XLOC_017711 gphnb coding upstream 62291 50852356 ~ 50999404 (+)
XLOC_017710 fut8b coding upstream 321291 50650143 ~ 50740404 (+)
XLOC_017709 NA coding upstream 557431 50451469 ~ 50504264 (+)
XLOC_017708 NA coding upstream 729151 50329228 ~ 50332544 (+)
XLOC_017707 CU570682.1 coding upstream 811868 50248092 ~ 50249827 (+)
XLOC_017715 eif2s1b coding downstream 26431 51104367 ~ 51123265 (+)
XLOC_017716 NA coding downstream 90976 51168912 ~ 51173504 (+)
XLOC_017717 hsp90ab1 coding downstream 119822 51197758 ~ 51213829 (+)
XLOC_017718 tmem151ba coding downstream 234947 51312883 ~ 51334529 (+)
XLOC_017719 CU660013.4 coding downstream 311965 51389901 ~ 51391289 (+)
XLOC_017706 NA non-coding upstream 763352 50210097 ~ 50298343 (+)
XLOC_017700 NA non-coding upstream 1601938 49450993 ~ 49459757 (+)
XLOC_017720 CU660013.1 non-coding downstream 329144 51407080 ~ 51411179 (+)
XLOC_017723 CU929372.1 non-coding downstream 438266 51516202 ~ 51516318 (+)
XLOC_017724 NA non-coding downstream 569658 51647594 ~ 51667197 (+)

Expression


Co-expression Network