XLOC_017823 (EPB41L2)


Basic Information

Item Value
gene id XLOC_017823
gene name EPB41L2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 2287298 ~ 2361226 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035217
GCGTTGGCCCAGGCTATAAAGGAGGCCAAAGAGCAGCACCCTGACATGTCAGTGACCCGCGTGGTGGTGCACAAAGAGACGGAGCTGGCCGAGGAGGACGACTGAAGCGCAGaGCTGAAGTCGGGCTGGTCAGAGCGGGTCGCCGGTGGAGGAGGAACATCTGCATCTTCTATCATTCACAACCAGAACCACTTAGCTAACATttgtagcattttatttttttagtgtttgttttatCTCTATTTTACCCCCCCTCCCCTCTCAaaagatcgtcttgaccatttaTGAAGACcagatttatgttatttttattgtcgATTAGTAATTCACATTCCTAGTTCACGGGTTTGGAGAGGAGGAGTCCTGTTGGGgcgtaatattaattaat
>TCONS_00035218
ATGACGACAGAGGCGGGATCAGAGACGGATGTGAAGAAGGAACCAGAGAAGGTTCCTGAAGTTGAGCAGCAGCAGGAGCAGGAGACGGTTCCTCCACAAACAGAGGAGCAAAGCAGCAAACCAGCAGAGAGTGAAGCCCCGCCCACTGCAGCCGCTGCTGCCGACCAACCACAGAAGAAGGAGAAGGGCATCTCTCGCTTCCTGCCTCCATGGCTTAAACGACAGAAATCCCAGAGCCAGGAGAAACCGGCTGAGAGCCCAACGCCACACACAGAGCCCATCGAGGAGAAGAGCGTCAAGGAGGAGGACGAGGAGGAGAAGAAGAGCGGAGACCAGCCGGACGGAGGAGCTGCAGAGCGGACGGAGGAGGTAGAGGTGAAAGAGGAGGCTCAGAGCAGACCACAGGAGGAAGAGCAGgagaaagaagaggaggagaaggagaaagaggaggagaagtCTGTCGGCAGTGCTGACACACAGAAGAAAGAGCAAGAGCAAGTGATCCAGCCGGAGGAGAGCGCGGCGCTGCTGCCACACAAACTCAGCAAGAAGATGAAGATGGTGGTGTGTCACGTCACCTTGCTGGACGGCAGCCAGTTCTCCTGTGAGGTGGAGAAACGGGCGAAAGGCCAGTACCTGTTTTTTGAAGTGTGTGAGCACCTGAATCTGGTGGAGAAGGATTACTTCGCACTGAGTTTTAAAGACAACGCTGAGCAGAGGtGCTGGCTGGACCCGACCAAGGAGATCAAGCGTCAGATCCGCAACTCTCAGTGGCAGTTTGCGTTCAGTGTCAAGTTTTACCCTCCTGACCCGTCCCAGCTGACCGAGGACTTGACCAGGTATCTGTTATGTCTTCAGCTGCGGCAGGACATCGCGTCGGGACGGCTGCCGTGTTCATTCGTCACACACGCTTTGTTGGGCTCCTACGCCCTGCAGGCCGAGCTGGGCGACCAGGACCCGGACGAGCACCGCCTCGACTACATCTCAGACTTCCAGTTCGCCCCAAACCAGACCAAGGAGCTGGAGGAGAAAGTGATGGAGCTGCACAAGTCCCACAGGGGAATGACTCCAGCCCAAGCAGACGCCCAGTTTTTGGAAAATGCCAAGAAGCTGTCCATGTATGGTGTAGACCTGCATCACGCCAAGgactCTGAGGGAGTGGACATCATGTTGGGAGTGTGTGCGAACGGTTTGTTAATCTATAAGGACCGTCTGCGGATAAACCGCTTCGCTTGGCCCAAAATCCTCAAGATTTCCTACAAGCGCAGCAACTTCTACgctgAGCAGTTCGAGAGCACCGTGGGCTTCAAGCTGCCCAATCACCGCGCTGCCAAAAGAGTCTGGAAAGTGTGTGTGGAACATCACACCTTCTTCAGGTTGACGTCTCCTGAACAGCCCACTAAGAGCAAGTTTCTGACTCTGGGCTCTAAGTTCCGCTACAGCGGGCGGACGCAGGCACAGGCGAGGCAGGCCAGCACCCTCATCGACCGGCCCACGCCGTACTTCCAGCGCACCTCCAGCAAACGCATCTCCCGCAGCCTGGACGGAGCATCGGTGACGTCTGTGGTCAGTGGTGCTCTCTCTACTGCTGGCGCTGCCTCTGGCTTTGTCTCTCTGCTACCTGGAGCCCAAAGCGTATGTGCTTTTTCGGCCACCAGCGGTCACAGCAGAGCTGACCTCTCCAGAGATAGTTCAAATTGCTTTCAAAGAAAGAGCAAATGCACTCAAATCTTTGAAAAGGTAAACATTAAAGTAATTTATTGTCAAATATCTACCTTTACTATAAGCACCACCTACTGTCGtatttcaTTTGCTCGAAAACcccatctatggaagtctatggttaccgGTATGTCAGGTTCAGTCTTAGTTTTATgtttggaatcacttgaggttGAAACAGTTAATTTAACTACTGAGAAATAcacAATTGAAGATACAAACAAATCACATTTTATACCCGAATTGTTTAGTATAAAAGACATTACACCTCTGGAGAGTCCTCATGAAACATCAAAATCAGTTTGTTCTACTGAAAAATCAAgtacttttttaaatGACCGCAGTTTATCGTCCGACAGCGAGAGTGAAGACGAGGCTGAGTATCACGCGCACACGCCCAGCATCTCAGTCCAGCTGATCAAAGAAGAGCCAGAGGAGGAGCTTAACCAACAAGCCCCGCCCTCTGAGCCTGAGCCAATCACAGAAACAGAGCCAGCAGTCCCTGCCCCCTCTGCACAAACCGAAGAGGATGAAGCTCCCAATGGACACTCCCCCATTCCAGAAGCCCCGCCCACTGAGACAGAAGAGGAGGAGCCTCACATCGTCAATGGCGGCGTTTCTCGAGTGGAAACGGAGGTTATTTGTTGTTCGGAGCCTCCAGTTGTGAAGACGGAGATGGTGACCATTTCAGACACGTTTGCAGCGCAGAAGACGGAGATCTCCACTAAAGAGGTGCCCATCGTTCACACCGAGACCAAGACCATCACCTATGAAGCTGCGCAGctggaTGGTAATGGAGACGGAGAGCCTGGTGTCCTCATGACTGCCCAAACCATCACCTCTGAGTCTCTctgcaccaccaccaccacacacATCACCAAGTCCTTCAGTACTTCCTTCAGtccttctttcttctttgatttgtttgctttgtttgttcatgtgtgtgtgtgtggtgcggGTCAGGCGTTGGCCCAGGCTATAAAGGAGGCCAAAGAGCAGCACCCTGACATGTCAGTGACCCGCGTGGTGGTGCACAAAGAGACGGAGCTGGCCGAGGAGGACGACTGA
>TCONS_00035219
ATGAAGATGGTGGTGTGTCACGTCACCTTGCTGGACGGCAGCCAGTTCTCCTGTGAGGTGGAGAAACGGGCGAAAGGCCAGTACCTGTTTTTTGAAGTGTGTGAGCACCTGAATCTGGTGGAGAAGGATTACTTCGCACTGAGTTTTAAAGACAACGCTGAGCAGAGGtGCTGGCTGGACCCGACCAAGGAGATCAAGCGTCAGATCCGCAACTCTCAGTGGCAGTTTGCGTTCAGTGTCAAGTTTTACCCTCCTGACCCGTCCCAGCTGACCGAGGACTTGACCAGGTATCTGTTATGTCTTCAGCTGCGGCAGGACATCGCGTCGGGACGGCTGCCGTGTTCATTCGTCACACACGCTTTGTTGGGCTCCTACGCCCTGCAGGCCGAGCTGGGCGACCAGGACCCGGACGAGCACCGCCTCGACTACATCTCAGACTTCCAGTTCGCCCCAAACCAGACCAAGGAGCTGGAGGAGAAAGTGATGGAGCTGCACAAGTCCCACAGGGGAATGACTCCAGCCCAAGCAGACGCCCAGTTTTTGGAAAATGCCAAGAAGCTGTCCATGTATGGTGTAGACCTGCATCACGCCAAGgactCTGAGGGAGTGGACATCATGTTGGGAGTGTGTGCGAACGGTTTGTTAATCTATAAGGACCGTCTGCGGATAAACCGCTTCGCTTGGCCCAAAATCCTCAAGATTTCCTACAAGCGCAGCAACTTCTACATCAAGATCAGGCCGGGAGAGgctgAGCAGTTCGAGAGCACCGTGGGCTTCAAGCTGCCCAATCACCGCGCTGCCAAAAGAGTCTGGAAAGTGTGTGTGGAACATCACACCTTCTTCAGGTTGACGTCTCCTGAACAGCCCACTAAGAGCAAGTTTCTGACTCTGGGCTCTAAGTTCCGCTACAGCGGGCGGACGCAGGCACAGGCGAGGCAGGCCAGCACCCTCATCGACCGGCCCACGCCGTACTTCCAGCGCACCTCCAGCAAACGCATCTCCCGCAGCCTGGACGGAGctCCTATGGTCAACATAAGCGATTACAGTCGTGCCGTGGACTCTGCCGCCGGTGGAGATAACGGTCCAGCCCTGGAGCTCAACTCTGACTCTAAGgcacaGTCCACGGAGCTGCCGAAATCACAaagcgtcccggtgtgtacaaGCCTTAAGACTGAAATGCAaacttatacttctgcgtcaggcgCACTCGCATGGCAAATGCACTCAAATGTTAGGGTGCAGGGTAGGACGCAGGTAATTATCCATAATAAAaacacattagaagatattttaaaGGTGCAGGAAAACATATCtcgtcataaatctgtcattaaCATGATTGCCACGAGGCCATTGTACTTGTGTCCTGAATgcaaccctggctgctggaataaaagagtcaaaaactcacATACAGCACTTTTAACAATCACATTTCCCACTGCTCCACAGATCAGCTCTTCTCTCCCCGAGGCCGACCGCAGAGACGCCAGCAAGAGCACAGAGGTCAAACCTGAGGTCAACGGTCAGCCAGAGGTTGTAGAAGTCGTGGAAGAAACCGTGGTCATCGAGGAGGTGGTCAAAGCCAAGCCCAAAAGTCCCACTCCTGAACCAGAGAGCGCGGCGCAGGACCGCAGTTTATCGTCCGACAGCGAGAGTGAAGACGAGGCTGAGTATCACGCGCACACGCCCAGCATCTCAGTCCAGCTGATCAAAGAAGAGCCAGAGGAGGAGCTTAACCAACAAGCCCCGCCCTCTGAGCCTGAGCCAATCACAGAAACAGAGCCAGCAGTCCCTGCCCCCTCTGCACAAACCGAAGAGGATGAAGCTCCCAATGGACACTCCCCCATTCCAGAAGCCCCGCCCACTGAGACAGAAGAGGAGGAGCCTCACATCGTCAATGGCGGCGTTTCTCGAGTGGAAACGGAGGTTATTTGTTGTTCGGAGCCTCCAGTTGTGAAGACGGAGATGGTGACCATTTCAGACACGTTTGCAGCGCAGAAGACGGAGATCTCCACTAAAGAGGTGCCCATCGTTCACACCGAGACCAAGACCATCACCTATGAAGCTGCGCAGctggaTGGTAATGGAGACGGAGAGCCTGGTGTCCTCATGACTGCCCAAACCATCACCTCTGAGTCTCTctgcaccaccaccaccacacacATCACCAAGGTAACTCCCAAACACATAAtgagacaacacacacacaccaccacgttaacacacactcacaaccatggcaacatgcacacatacacacacacatcaccaaaATAA
>TCONS_00035220
GCTCCACAGATCAGCTCTTCTCTCCCCGAGGCCGACCGCAGAGACGCCAGCAAGAGCACAGAGGTCAAACCTGAGGTCAACGGTCAGCCAGAGGTTGTAGAAGTCGTGGAAGAAACCGTGGTCATCGAGGAGGTGGTCAAAGCCAAGCCCAAAAGTCCCACTCCTGAACCAGAGAGCGCGGCGCAGGACCGCAGTTTATCGTCCGACAGCGAGAGTGAAGACGAGGCTGAGTATCACGCGCACACGCCCAGCATCTCAGTCCAGCTGATCAAAGAAGAGCCAGAGGAGGAGCTTAACCAACAAGCCCCGCCCTCTGAGCCTGAGCCAATCACAGAAACAGAGCCAGCAGTCCCTGCCCCCTCTGCACAAACCGAAGAGGATGAAGCTCCCAATGGACACTCCCCCATTCCAGAAGCCCCGCCCACTGAGACAGAAGAGGAGGAGCCTCACATCGTCAATGGCGGCGTTTCTCGAGTGGAAACGGAGGTTATTTGTTGTTCGGAGCCTCCAGTTGTGAAGACGGAGATGGTGACCATTTCAGACACGTTTGCAGCGCAGAAGACGGAGATCTCCACTAAAGAGGTGCCCATCGTTCACACCGAGACCAAGACCATCACCTATGAAGCTGCGCAGctggaTGGTAATGGAGACGGAGAGCCTGGTGTCCTCATGACTGCCCAAACCATCACCTCTGAGTCTCTctgcaccaccaccaccacacacATCACCAAG

Function

symbol description
epb41l2 Predicted to enable PH domain binding activity; cytoskeletal protein binding activity; and structural molecule activity. Involved in positive regulation of protein localization to cell cortex. Located in cell junction; nucleoplasm; and plasma membrane. Colocalizes with COP9 signalosome.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093374

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035217 False 388 mRNA 0.47 2 2287298 2290529
TCONS_00035218 False 2793 mRNA 0.53 30 2290425 2361226
TCONS_00035219 False 2280 mRNA 0.54 27 2292479 2355357
TCONS_00035220 True 732 mRNA 0.57 4 2292584 2298970

Neighbor

gene id symbol gene type direction distance location
XLOC_017821 NA coding downstream 147052 2135895 ~ 2140246 (-)
XLOC_017820 tmem244 coding downstream 152678 2118356 ~ 2134620 (-)
XLOC_017819 NA coding downstream 196509 2058938 ~ 2090789 (-)
XLOC_017818 CABZ01065425.1 coding downstream 439865 1846081 ~ 1847433 (-)
XLOC_017817 NA coding downstream 523820 1745225 ~ 1763478 (-)
XLOC_017824 NA coding upstream 55229 2416455 ~ 2425360 (-)
XLOC_017825 NA coding upstream 116990 2478216 ~ 2481821 (-)
XLOC_017826 BX072559.1 coding upstream 136295 2497521 ~ 2498941 (-)
XLOC_017827 med23 coding upstream 138396 2499622 ~ 2584115 (-)
XLOC_017828 bub1 coding upstream 249324 2610550 ~ 2641246 (-)
XLOC_017928 CU539064.1 misc upstream 7692179 10053405 ~ 10053701 (-)
XLOC_017809 BX248418.2 non-coding downstream 1088589 1198079 ~ 1198709 (-)
XLOC_017799 NA non-coding downstream 1753222 530511 ~ 534076 (-)
XLOC_017831 NA non-coding upstream 354723 2715949 ~ 2725930 (-)
XLOC_017833 NA non-coding upstream 614479 2975705 ~ 2979084 (-)

Expression


Co-expression Network