XLOC_018062 (ociad1)


Basic Information

Item Value
gene id XLOC_018062
gene name ociad1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 23245620 ~ 23254876 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035591
ACGCCTGCACTTCCGGGTTGGTCTGTTTTCCTAATAAGAGTCGACTGGAGGTCATGTCATAAAATGTGTCGTTGAACTTGTTGACTGGTAATCCGCGTAATCCCATGGCTACTGCAAAAACgttgtttttgtaattgcatcTAGGATTGGTCATGTCGCAAGCATCGTCTGGATTCACTCCGGCTGCCCAAGTCCAGCATGGGTCCAGTAAGGGTGCTTTTAATTCTGCTTATATTCCCACTGAAGAAGAGAAGCGTGTCTTCAGGGAGTGCAACTCAGAAAGCTTCTGGTACAGATCTTTACCATTTTCTGCAATAGCAGTCGGAATCACTCAGGTACTGGTAGCAAAAGGAATGCTTTCTCCATCTCCACGATTTGGTGCGCTTCCTAAAATTGCCTTTGCTGGCATATTTGGATACATCGGTGGAAAAATGTCTTACGTGAGGGTCTGTCAAGAAAAGTTTATGAAACTGGAGAACTCTCCACTGGGAGAGGCATTACGACAGGGACGTCTGCGTCACGTGTCTTCTGAGATGAACCAACCCGATTTTGATCCAAACTCATCTGAATCTCAGCAGCCTGGTTCAGAGTCCGTCCAACAGCCTGCGACAGAAGTCAGCTCTGCAACTGAGAGCTACAGCAGCTACACCAGCGATTACACCTACAGTACCCCATCTCAATCATACGAAACCACTCCTTTCAGCTCTGGATTCAGTGATTCTGGTCCTGCTAACATCAGGGATGATTTACCCTCGCAAGCGCCACTCTATATGGAAGAGGATGTGCCCAAGAGAAAGCCAGTGTTGTATGAGGAACTGCGTAACAAGAACAGGGAGAACTATGAAGTCACGCTCCCACAGAAAAACCAAACGCAAATGAAACCACAAATGGAGGTGATGCAACCCAAAAAGGAAGCTAAAAAGAACAAGTATGGTGATTCCTGGGAAGAGTAAGAGAATCAGATGACTGAAGAACTCCAAATGGCTGTGGTGTTTCCTCGCCTCATCCTGCCGGATCAGACCAAATATCTGATTTATAATGCTGAATTGAAGATGAATGTATTTTAAGGAGCAAGGCCTTGGAAATGAATGCAAATTTTGTAGAATCAAGTCTATTTGCTCAGATAAAATATGTAATCTTGGCTTCTTGTTTGTCAATTTAAGTATCAGTGTTAGGAGAAATGATTTCCAACAAAACCtttttcaaacataataataatttaaatataatataagtgTAATAGATGCCCAGGAATGGCCATGTAACAAATAAAACCATCAAAAGTTGATTCTCCACTGAAAATTTAGTTCAACGCAGTTTTAAAGCTATGCACAGGTTACTGTTATCATGACAGTGTTATGACTGTAGATGTGTTTAGACTTGGACCCATGATAATCATGACATCATCGTTAACTGATGTTACAGTTTATAGTCTTGTCCTCTAAGCTGGAAATAAGAGATGAGGATTTCATTGTACTGAAGTTCATTTTATTCTCATtttaaatgaagatttttcattcagatgttcagttatttcaaatAAAGCTGGTGAAATCTGCAAA
>TCONS_00035592
CATAACTTGTCTACCAACTGATAATATCCTGCGAGGGGAAGTGCATGTGATACGACAACCGATGAGAGTTAAACAATAAGTTTACTCTCCCTGCCCAACGTTAGACGTCGGATATTTGAGGATTGGTCATGTCGCAAGCATCGTCTGGATTCACTCCGGCTGCCCAAGTCCAGCATGGGTCCAGTAAGGGTGCTTTTAATTCTGCTTATATTCCCACTGAAGAAGAGAAGCGTGTCTTCAGGGAGTGCAACTCAGAAAGCTTCTGGTACAGATCTTTACCATTTTCTGCAATAGCAGTCGGAATCACTCAGGTACTGGTAGCAAAAGGAATGCTTTCTCCATCTCCACGATTTGGTGCGCTTCCTAAAATTGCCTTTGCTGGCATATTTGGATACATCGGTGGAAAAATGTCTTACGTGAGGGTCTGTCAAGAAAAGTTTATGAAACTGGAGAACTCTCCACTGGGAGAGGCATTACGACAGGGACGTCTGCGTCACGTGTCTTCTGAGATGAACCAACCCGATTTTGATCCAAACTCATCTGAATCTCAGCAGCCTGGTTCAGAGTCCGTCCAACAGCCTGCGACAGAAGTCAGCTCTGCAACTGAGAGCTACAGCAGCTACACCAGCGATTACACCTACAGTACCCCATCTCAATCATACGAAACCACTCCTTTCAGCTCTGGATTCAGTGATTCTGGTCCTGCTAACATCAGGGATGATTTACCCTCGCAAGCGCCACTCTATATGGAAGAGGATGTGCCCAAGAGAAAGCCAGTGTTGTATGAGGAACTGCGTAACAAGAACAGGGAGAACTATGAAGTCACGCTCCCACAGAAAAACCAAACGCAAATGAAACCACAAATGGAGGTGATGCAACCCAAAAAGGAAGCTAAAAAGAACAAGTATGGTGATTCCTGGGAAGAGTAAGAGAATCAGATGACTGAAGAACTCCAAATGGCTGTGGTGTTTCCTCGCCTCATCCTGCCGGATCAGACCAAATATCTGATTTATAATGCTGAATTGAAGATGAATGTATTTTAAGGAGCAAGGCCTTGGAAATGAATGCAAATTTTGTAGAATCAAGTCTATTTGCTCAGATAAAATATGTAATCTTGGCTTCTTGTTTGTCAATTTAAGTATCAGTGTTAGGAGAAATGATTTCCAACAAAACCtttttcaaacataataataatttaaatataatataagtgTAATAGATGCCCAGGAATGGCCATGTAACAAATAAAACCATCAAAAGTTGATTCTCCACTGAAAATTTAGTTCAACGCAGTTTTAAAGCTATGCACAGGTTACTGTTATCATGACAGTGTTATGACTGTAGATGTGTTTAGACTTGGACCCATGATAATCATGACATCATCGTTAACTGATGTTACAGTTTATAGTCTTGTCCTCTAAGCTGGAAATAAGAGATGAGGATTTCATTGTACTGAAGTTCATTTTATTCTCATtttaaatgaagatttttcattcagatgttcagttatttcaaatAAAGCTGGTGAAATCTGCAAA
>TCONS_00035593
TCCAACAGCCTGCGACAGAAGTCAGCTCTGCAACTGAGAGCTACAGCAGCTACACCAGCGATTACACCTACAGTACCCCATCTCAATCATACGAAACCACTCCTTTCAGCTCTGGATTCAGTGATTCTGGTCCTGCTAACATCAGGGATGATTTACCCTCGCAAGCTAAAAAGAACAAGTATGGTGATTCCTGGGAAGAGTAAGAGAATCAGATGACTGAAGAACTCCAAATGGCTGTGGTGTTTCCTCGCCTCATCCTGCCGGATCAGACCAAATATCTGATTTATAATGCTGAATTGAAGATGAATGTATTTTAAGGAGCAAGGCCTTGGAAATGAATGCAAATTTTGTAGAATCAAGTCTATTTGCTCAGATAAAATATGTAATCTTGGCTTCTTGTTTGTCAATTTAAGTATCAGTGTTAGGAGAAATGATTTCCAACAAAACCtttttcaaacataataataatttaaatataatataagtgTAATAGATGCCCAGGAATGGCCATGTAACAAATAAAACCATCAAAAGTTGATTCTCCACTGAAAATTTAGTTCAACGCAGTTTTAAAGCTATGCACAGGTTACTGTTATCATGACAGTGTTATGACTGTAGATGTGTTTAGACTTGGACCCATGATAATCATGACATCATCGTTAACTGATGTTACAGTTTATAGTCTTGTCCTCTAAGCTGGAAATAAGAGATGAGGATTTCATTGTACTGAAGTTCATTTTATTCTCATtttaaatgaagatttttcattcagatgttcagttatttcaaatAA

Function

symbol description
ociad1 Predicted to be active in endosome. Orthologous to human OCIAD1 (OCIA domain containing 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005768 endosome cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1100 Predicted to be active in endosome. Orthologous to human OCIAD1 (OCIA domain containing 1).

Ensembl:

ensembl_id ENSDARG00000052334

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035591 False 1562 mRNA 0.41 8 23245620 23253630
TCONS_00035592 False 1538 mRNA 0.41 9 23245620 23254876
TCONS_00035593 True 793 processed_transcript 0.36 2 23245639 23248639

Neighbor

gene id symbol gene type direction distance location
XLOC_018061 dcun1d4 coding downstream 19167 23203946 ~ 23226453 (-)
XLOC_018060 NA coding downstream 48962 23194788 ~ 23196658 (-)
XLOC_018059 spata18 coding downstream 74190 23160512 ~ 23171430 (-)
XLOC_018058 NA coding downstream 86122 23157083 ~ 23159498 (-)
XLOC_018056 NA coding downstream 162156 23081271 ~ 23083464 (-)
XLOC_018063 zar1 coding upstream 168938 23423814 ~ 23426339 (-)
XLOC_018064 slc10a4 coding upstream 176609 23431485 ~ 23440955 (-)
XLOC_018065 slain2 coding upstream 191367 23446243 ~ 23472319 (-)
XLOC_018066 anapc4 coding upstream 220505 23475381 ~ 23494712 (-)
XLOC_018067 cbr4 coding upstream 395956 23650832 ~ 23657304 (-)
XLOC_017928 CU539064.1 misc downstream 13191919 10053405 ~ 10053701 (-)
XLOC_018057 CU693368.1 non-coding downstream 163824 23081660 ~ 23081796 (-)
XLOC_018054 BX511028.1 non-coding downstream 335308 22910198 ~ 22910312 (-)
XLOC_018074 NA non-coding upstream 933101 24187977 ~ 24188631 (-)
XLOC_018075 NA non-coding upstream 980050 24234926 ~ 24272463 (-)
XLOC_018077 NA non-coding upstream 1193131 24448007 ~ 24454929 (-)
XLOC_018078 NA non-coding upstream 1474255 24729131 ~ 24732309 (-)
XLOC_018080 NA non-coding upstream 2052919 25307795 ~ 25311454 (-)

Expression


Co-expression Network