XLOC_018944 (or132-2)


Basic Information

Item Value
gene id XLOC_018944
gene name or132-2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 25344374 ~ 25345902 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037628
TACAAATGTCAAGTCAATATCTGCCAACAAAGCTGCTAAGCAGAAACATTTCTTTAGGCAGGATCATCAGTATAACTGCTTTATTTATTACTGTCTTGTTTGTCTGTTTCTTGTTTTTCAGCTTATGGACTCCAATGGCACAAATGGTGATGTGCCTTTCCTTCATCAGCAAGTATTTCAGCTGGATTGGGATCCTCTCACCATTTGTGAAACTATATTGGCTGTGTTAACatctctgtttttcttttttgtcaacTGCGTGATGTTCCTGGCTCTAAAAAGCAAGCACATATTCTTTGAGACGCCACGCTATATTCTTTTTGGCCACATGCTTATGAATGACTCTGTGCTTTTGCTGCTAACAACTGTCATGTTCATGTTGGCTCTGTGTTTTTATCCAATACATAAATCCATATGTACTCTGTTAGTCTTCACCTCAACCCTTGCTTTCAATAATGCTCCTCTGACTCTAGCACTGATGTCTCTGGAGCGATATGTTGCAATCTGCTTCCCTCTGAGACACTGCACCATCGCCACACCTAAAAGAACTGGAATCGCCATTGGAATCATCTGGTTTCTAAGTACGATCAATGTTATCATAGATATAATTATTGCTTTAGTTAATAACCCAAATTATTTAGCAGATATTGCATTTTGTACACTGGAGCAATTGTATATAGCCAAATGGCAGGTGGATAAAGCTCAGTGgttttctgtgttttattttgtgtctgTTGCAGTGATCATTATATCAACATATATTAGCATTATGATCACAGCCAGGTCTGTTTCATCTGATAAAGATTCTGCTAAAAAAGCTCTAAGAACAGTGATGTTGCACTTGATTCAGCTGGGACTGTGTCTCACCTCTTTTTTATTTGCCACAATAGAGATGATACTATACATTATGATAGGAAGCACATCGCCTCTCTTCATCAATCTgagatatttaaattattttgttgttCTCATTCTACCACGTTGTTTGAGTCCTCTGATCTATGGCATGAGAGATGAAGCTGTGTGGCCCTTGTTCAAATATTACTTCTGCTATCGCTCAGGCAAAGTAAAGCCCTCTgttaatgtgcattaaaaatatGAAAGGATTCgaaataacaatgtgaaaaagCAAATGGGAATGTCAAATAAAACTACATGTAAATAACTAttatatgatattttatattatgtatggttatataattatttaagtcACTGTCAATCTTCAAAAATTAATGAAATGATtaacttaatattatttaataatcaaattattGACTATTTAAATTATTGAAAGTTAATATTTACATCTGAAATGTGGTAATAAATAGGTTAAGTTCTCTGTAGACCATATGTTTTCATAACTGCTTTTCAGGCTTAATTTGTGATGTGTCTTGAACATTTTAAAGCCCTCAGGAAAGTTTTTGAAAACATACAGTATTCTTAACTAAAAAAATTGGTTTACATTTTGAAAGGGTTGGTGATATACtcataagcaaaaaaataatattaaatgttttttatttaaa

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-48 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000105762

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037628 True 1529 mRNA 0.34 1 25344374 25345902

Neighbor

gene id symbol gene type direction distance location
XLOC_018943 or132-2 coding upstream 5687 25335807 ~ 25338687 (+)
XLOC_018942 or132-1 coding upstream 18529 25323331 ~ 25325845 (+)
XLOC_018941 tmem45b coding upstream 97322 25236297 ~ 25247052 (+)
XLOC_018940 gng8 coding upstream 108448 25231160 ~ 25235926 (+)
XLOC_018939 sycn.2 coding upstream 117183 25226558 ~ 25227191 (+)
XLOC_018945 BX510938.2 coding downstream 183 25346085 ~ 25346388 (+)
XLOC_018946 BX510938.5 coding downstream 879 25346781 ~ 25347003 (+)
XLOC_018947 or132-4 coding downstream 8204 25354106 ~ 25356174 (+)
XLOC_018948 or132-3 coding downstream 18436 25364338 ~ 25365870 (+)
XLOC_018949 BX510938.4 coding downstream 19977 25365879 ~ 25366134 (+)
XLOC_018929 NA non-coding upstream 475462 24865149 ~ 24868912 (+)
XLOC_018928 BX510932.1 non-coding upstream 594595 24749662 ~ 24749779 (+)
XLOC_018927 BX510932.2 non-coding upstream 676037 24668221 ~ 24668337 (+)
XLOC_018926 CR759955.1 non-coding upstream 796774 24547524 ~ 24547600 (+)
XLOC_018924 NA non-coding upstream 842691 24456028 ~ 24501683 (+)
XLOC_018951 BX510938.3 non-coding downstream 31053 25376955 ~ 25377279 (+)
XLOC_018952 NA non-coding downstream 88787 25434689 ~ 25436244 (+)

Expression


Co-expression Network