XLOC_018943 (or132-2)


Basic Information

Item Value
gene id XLOC_018943
gene name or132-2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 25335807 ~ 25338687 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037627
CATAAAGGCTTACAAATGTCAAGTCAATATCTGCCAACAAAGCTGCTAAGCAGGAACATTTCTTTTGCAAGGATCATTGCTATAACCACATTATTTATTACTGTCTTGTTTGTCTGTCTCTTGTTTTTCAGCTTATGGACTCCAATGGCACAAGTGGTGATGTGTCTTTCCTTTATCAGCAAGTATTTCAACTGGATTGGGATCCTCTCACCATTTGTGAAACTATATTGGCTGTGTTAACatctctgtttttcttttttgtcaacTGCGTGATGTTCCTGGCTCTAAAAAGCAAGCACATATTCTTTGAGACGCCACGCTATATTCTTTTTGGCCACATGCTTATGAATGACTCTGTGCTTTTGCTGCTAACAACTGTCATGTTCATGTTGGCTCTGTGTTTTTATCCAATACATAAATCCATATGTACTCTGTTAGTCTTCACCTCAACCCTTGCTTTTATTAATGCTCCTCTGACTCTAGCTCTGATGTCTCTGGAGCGATACGTGGCAATCTGCTTCCCTCTGAGACACTGCACCATCGCCACACCTAAAAGAACTGGAATCGCCATTGGAATCATCTGGTTTCTAAGTACGATCAATGTTATCATAGATATAATTATTGCTTTAGTTAATAACCCAAATTATTTAGCAGATATTGCATTTTGTACACTGGAGCAATTGTATATAGGCAAATGGCAGGTGGATAAAGCTCAGgtgttttctgtgttttattttgtgtctgTTGCATTGATCATTATATTCACATATATTAGCATTATGATCACAGCCAGGTCTGTTTCATCTGATAAAGAATCTGCTAAAAAAGCCCTTAAAACAGTGATGTTGCACTTGATTCAGCTGGGACTGTGTCTCACCTCTTTTCTCTATGCCACAATAGAGAGAACACTATTCATTATGATTGGAAGTGGTTCTCCTCTATTCATTAATCTgagatatttaaattattttgttgttCTCATTCTACCACGTTGTTTGAGTCCTCTGATCTACGGCATGAGAGATGAAGCCGTGTGGCCCTTGTTCAAATATTTCTTCTGCTATCGTTCAGGCAGCATAAAACCATCTGTTAATGTCCATTAACTATATTGTATGAGAAGACAttaaataatttgataaaaatagtaataacaataagatttgaatttaaatttattaacaataaGTATTATGTCAATGCTGTTATTTGATATTATATTTGATGTTATGTACtaatacactacttgacaaaagtcttgtcgtcaattcCAGCTGTAAGGgcaactaataataacttgacttctagttgatcatttggaaaaatggcagaaaGTCGATTttactgatgaatcatctgttaaactgcatcccaatcatcacaaatactgcaaaagacctactggaacctgcatgggcCAAAGATTCTTACAAAAATcagacaagtttggtgaaggaaaaaatcatggtttggggttacattcaatatgggggtgtatgagagatctgcagagtgaatggcaacatcgacagcctgaggaatcaagacatttgtgctgcccaatacattacaaaccacaggagatgcAAACTCTTCAGCAGAAAAGCACTAAAAGGATGAAGGAAGAGGCAGCAAGGTGTATCCATAcaattttgatgaactctgggagtcctgcaagaacactttctctGCCATTCCAAATGACTATATTACAGGGGCTGGCAAACAGTTTAGCTCCAGCTCTAATCACACACAtatgcttatagatttctagtgatcttgaagacactgattagcattttcaggtgtgtttgatggtgttgcagctaaactgtgcaggacaccggccctctaggacagagtttgcccacccctgctttaTAAGTAAgttttttgagtcattgcagagatgtatggatgcagtcctacaGTCATacacacaatatttattcttttttcactgcaacatgactttgtattgtatactgtacattatttctgttaagtgacaaaactttagtctaagcaaagtcagaccttactgtcccaattaaataattaaaaatcaaggcatgattatattttgttttggtaaaatgagtgtagtttagaggcctttgccttttatataagccactaaCAAGAAAGCgtacgaatgtgggccactttaggcattTATGCGACAATGGTGGTTTTCCTTCGGCCCAGACATAAAgaatgtgagcctaaagtggcccacctgtacaatgacAAAGGGGGGCCAAAGATTCCAATTCATATGTGgaccatttaaggcaaagatttggcattTCTGACAAaaagtaatctgaatgtgagcctaatgtggcccatgtggaaaatgataaATTTGACCCAAATGATGgaagacaaatgtgggccacagtagGCAAAAATGTGGCACAGTCACATttatctgggtctaaacctaaagtggctcaaacgtgtaagtgcaaatgtggccctgttatcttaaaacatatattagacacttttggcaaatatttggcacagtaaactctggctaatgcagtcGTTACCATATAGTGGCCTAGAAAAGACCAGGAAAATGTGTcacagttatcttaaaacatatgagggctacttttggcaaatattcggcacagttcTTATGCATGTCCTTTAGTTGAACTGTGGTTTTGCAATGCTGCATAAGCACTAATTTTTGGTTCTCCAGTTTTGATGCCCACCTAACTTTTATTCTATGTGAGCAATGTCCTTACCTCCGGGCTGCCGTATGACTCATATTGAAAGATCATACTGACCTTGTTTGTTTGTATCGATCTTCTCTACTATGGTTTCCACAGCTGAAttgtattattacaataaaatggacATCTTACAT

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-48 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000094515

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037627 True 2881 mRNA 0.38 1 25335807 25338687

Neighbor

gene id symbol gene type direction distance location
XLOC_018942 or132-1 coding upstream 9962 25323331 ~ 25325845 (+)
XLOC_018941 tmem45b coding upstream 88755 25236297 ~ 25247052 (+)
XLOC_018940 gng8 coding upstream 99881 25231160 ~ 25235926 (+)
XLOC_018939 sycn.2 coding upstream 108616 25226558 ~ 25227191 (+)
XLOC_018938 sycn.1 coding upstream 113279 25221940 ~ 25222528 (+)
XLOC_018944 or132-2 coding downstream 5687 25344374 ~ 25345902 (+)
XLOC_018945 BX510938.2 coding downstream 7398 25346085 ~ 25346388 (+)
XLOC_018946 BX510938.5 coding downstream 8094 25346781 ~ 25347003 (+)
XLOC_018947 or132-4 coding downstream 15419 25354106 ~ 25356174 (+)
XLOC_018948 or132-3 coding downstream 25651 25364338 ~ 25365870 (+)
XLOC_018929 NA non-coding upstream 466895 24865149 ~ 24868912 (+)
XLOC_018928 BX510932.1 non-coding upstream 586028 24749662 ~ 24749779 (+)
XLOC_018927 BX510932.2 non-coding upstream 667470 24668221 ~ 24668337 (+)
XLOC_018926 CR759955.1 non-coding upstream 788207 24547524 ~ 24547600 (+)
XLOC_018924 NA non-coding upstream 834124 24456028 ~ 24501683 (+)
XLOC_018949 BX510938.4 non-coding downstream 27192 25365879 ~ 25366134 (+)
XLOC_018951 BX510938.3 non-coding downstream 38268 25376955 ~ 25377279 (+)
XLOC_018952 NA non-coding downstream 96002 25434689 ~ 25436244 (+)

Expression


Co-expression Network