LOC110532414 (LOC106573136)


Basic Information

Item Value
gene id LOC110532414
gene name LOC106573136
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52810849 ~ 52815285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989674.1
ATGAATGAACATAGACATACACCCCAGTCCTTCAAAAACGGTAACTGTGCTAAATTCAGAGAGTCAGATGCTGTCCCCAACATGTTTTCCCTGATCTTTGCCTGTACCTGCGGGGTGATCCTGGGCATCGGTTTCTGTGCCAACCTACTGGTGTTCTCTCTGTTCGCCAAGTACAACACCCTGAGGAAGAACTGTCTGGACATCCTGCTGCTCAGCATGGCTCTGGCAGACTTCCTCACCCTGCTGCTCATCCCCTTCACCCTGCACTCCGCCATCAgCTACTCGTGGCCGCTGGGGGACACCTCCTGCAAGGTGTACCAGTTCTTTCTGGCCTTCTCCCTGGCAGCCAGCACCTACAGCCTGTGTGCCGTGTCCATGACACGCGCCATGATCATCACCAACCCCTACCACCCTCCTACCATGGACCTGGTGGTCCTGATGTTCGTCTTGGTCTGGGCATCAGCCTTCTTCATCAGCTTGCCTCTGAGGATCTTCGCCACCAAGGAGAGCCTGAGCCCCGGCTTGGGTAATTTTTCATTCTGCCTGCCCACCATACAGGAACACCACTATCAGgtGGTCCTCAGCCAGTTCATGCTCTACTACTTCGTCCCTATGCTGGTGATCGCCTTCAACTACGTCCGGTTGGCCTGCTTCCTCCACAAGAGCCCAGTCATGTCTGTGGCCAGTGCCCGCAACACACGCCGAGCCTCCTTTATGGTGTTCCTGGCGGCCGGGACCTTCTCCATCTGCTGGCTTCCCGGGTACATCCTGGAGCTGTGTGTGTACCTTGGGCTCTACCGCCACGGCCAGTCCTGGGAGATGTTCTACTTCATCTGCACCGTGCTCCAGTACCTCCATCCCTGTGTTAACCCCGTGCTCTATGTGCTGCTGTCCAAGAGGTACCGCCACCGCAGGAGTGCCTGGTTGTTTAACTGCAACAGGAATAGGGTGCAGCCGCAGGTTGTCAGCATCACTACAGAGACTATGTAGACACACTGGTCACGAGGGGAGCTGGCTTTGCTTTGAGATGGTGGAAAGCCTAATCTCGCCACCCAGGACGAAATATGGTGTGCGTATTATTGGGTGATGTTGATACAGTCTGAATATGAATACAGCACATTACATTGCAGTGCAGTACATTAGCTCACACTCATCGGTGAGGTTCCTGATGCAGTCTTTTTGTGTTGGTGTTTAACCGATCTGTTTATTTTAGTTTGTACAGTTACTTTCCACTTCTTCTTTTTGTGTTTCATTCTTGCAGGAACAGATTGACATGTACTGTATGAAGGATAAAAAGCGAGTAAAATGTTATTGTTTTAATGTTAAAATTGTTTTATTGTCTGTTGT

Function

NR:

description
PREDICTED: allatostatin-A receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989674.1 True 1347 mRNA 0.51 5 52810849 52815285

Neighbor

gene id symbol gene type direction distance location
LOC110524843 LOC106573072 coding downstream 41685 52766482 ~ 52769164 (-)
LOC110524838 LOC106573075 coding downstream 57544 52744317 ~ 52753305 (-)
LOC118964326 NA coding downstream 128236 52681889 ~ 52682613 (-)
LOC110524780 LOC106573150 coding downstream 156361 52644949 ~ 52654488 (-)
LOC110524766 pmge coding downstream 174151 52624357 ~ 52636698 (-)
LOC110521107 LOC106573149 coding upstream 876 52816161 ~ 52818942 (-)
LOC110524896 LOC106573068 coding upstream 128575 52943860 ~ 52955716 (-)
LOC118964864 NA coding upstream 194683 53007483 ~ 53020119 (-)
LOC110524937 LOC106573065 coding upstream 232455 53047740 ~ 53059946 (-)
LOC110524998 NA coding upstream 262373 53077658 ~ 53084723 (-)
G58080 NA non-coding downstream 27351 52779287 ~ 52783498 (-)
G58040 NA non-coding downstream 55407 52703837 ~ 52755442 (-)
G58059 NA non-coding downstream 71821 52734088 ~ 52739028 (-)
G58050 NA non-coding downstream 86728 52723762 ~ 52724121 (-)
G58138 NA non-coding upstream 49079 52864364 ~ 52864565 (-)
G58141 NA non-coding upstream 50129 52865414 ~ 52865614 (-)
G58458 LOC106573071 non-coding upstream 72254 52887539 ~ 52889793 (-)
G58475 LOC106573070 non-coding upstream 97375 52912660 ~ 52915682 (-)
G58469 NA non-coding upstream 109547 52924832 ~ 52925473 (-)
G57742 NA other downstream 314615 52495898 ~ 52496234 (-)
G56764 NA other downstream 1063629 51746617 ~ 51747220 (-)
G56372 NA other downstream 1406506 51400727 ~ 51412569 (-)
LOC110524514 borcs5 other downstream 2018780 50777716 ~ 50792069 (-)
G55627 NA other downstream 2043418 50765363 ~ 50767431 (-)
G58565 LOC106561659 other upstream 324173 53139458 ~ 53140304 (-)
LOC110525078 LOC105021811 other upstream 519439 53334724 ~ 53338484 (-)
G58718 LOC100194703 other upstream 610679 53425964 ~ 53426316 (-)
G58842 NA other upstream 773137 53588422 ~ 53588770 (-)
LOC110525178 LOC106581842 other upstream 946670 53761612 ~ 53774544 (-)

Expression


Co-expression Network