Gene
RNA
| Item | Value |
|---|---|
| gene id | G45134 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 41660882 ~ 41661111 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: selenoprotein O |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU50568 | True | 230 | lncRNA | 0.38 | 1 | 41660882 | 41661111 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cry1b | LOC106573292 | coding | downstream | 201614 | 41443448 ~ 41459268 (-) |
| zgc:153031 | LOC106573293 | coding | downstream | 219723 | 41431854 ~ 41441159 (-) |
| LOC110522853 | LOC106573294 | coding | downstream | 253745 | 41383791 ~ 41407137 (-) |
| LOC110532287 | LOC105925092 | coding | downstream | 387648 | 41223532 ~ 41273234 (-) |
| LOC110522810 | LOC106573296 | coding | downstream | 442114 | 41188896 ~ 41218768 (-) |
| LOC110532313 | LOC106573268 | coding | upstream | 369122 | 42030233 ~ 42058225 (-) |
| uri1 | LOC106573169 | coding | upstream | 420895 | 42082006 ~ 42096581 (-) |
| LOC110532319 | thas | coding | upstream | 690253 | 42351364 ~ 42461424 (-) |
| LOC118964616 | NA | coding | upstream | 806363 | 42467474 ~ 42473409 (-) |
| tspan33b | LOC106573176 | coding | upstream | 1175788 | 42836899 ~ 42847929 (-) |
| G45089 | NA | non-coding | downstream | 47462 | 41612220 ~ 41613420 (-) |
| G44971 | NA | non-coding | downstream | 268764 | 41390723 ~ 41392118 (-) |
| G44959 | NA | non-coding | downstream | 292270 | 41368258 ~ 41368612 (-) |
| G44951 | NA | non-coding | downstream | 297486 | 41363164 ~ 41363396 (-) |
| G44946 | NA | non-coding | downstream | 303880 | 41356730 ~ 41357002 (-) |
| G45136 | NA | non-coding | upstream | 718 | 41661829 ~ 41662033 (-) |
| G45137 | NA | non-coding | upstream | 1013 | 41662124 ~ 41662392 (-) |
| G45141 | NA | non-coding | upstream | 6005 | 41667116 ~ 41667496 (-) |
| G45174 | NA | non-coding | upstream | 51063 | 41712174 ~ 41712928 (-) |
| G45186 | NA | non-coding | upstream | 84898 | 41746009 ~ 41747344 (-) |
| G41868 | NA | other | downstream | 2638857 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 3469146 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 3535157 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 3943849 | 37716540 ~ 37717033 (-) |
| G38855 | NA | other | downstream | 5150053 | 36508538 ~ 36510829 (-) |
| tspan9a | LOC106573177 | other | upstream | 1377617 | 42852829 ~ 43129052 (-) |
| G49774 | NA | other | upstream | 4059694 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 4287847 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 5403663 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 5627828 | 47288939 ~ 47289681 (-) |
