XLOC_020143


Basic Information

Item Value
gene id XLOC_020143
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7452173 ~ 7452420 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041874
AGGCACTCATCTCCAAACAGCCACTTCACATGCACATTTTCATCCAGTTCGGTACCAGAATTTAGGGTGACATCATCTCCCTCCATCACCAACATCCTCCAATCTTCCTCTGAGAAATCTGCATGTAGAAAGAGACAATTCTAAACCCTGaacctttaagctaattttttcacCATCAGATCGAACAATTCCATTTTTTTATGCTGATTTTACTTCATCAAACAGCAGAACAGTAGAGCATTTCAGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041874 True 248 lncRNA 0.40 1 7452173 7452420

Neighbor

gene id symbol gene type direction distance location
XLOC_020142 cela1.6 coding upstream 4782 7439186 ~ 7447391 (+)
XLOC_020141 NA coding upstream 384384 7033248 ~ 7067789 (+)
XLOC_020140 NA coding upstream 424657 7025462 ~ 7027516 (+)
XLOC_020139 CU929149.1 coding upstream 502649 6943403 ~ 6949524 (+)
XLOC_020138 CABZ01065328.2 coding upstream 537616 6905210 ~ 6914557 (+)
XLOC_020144 cela1.1 coding downstream 10577 7462997 ~ 7470338 (+)
XLOC_020145 cela1.2 coding downstream 20000 7472420 ~ 7476352 (+)
XLOC_020146 cela1.3 coding downstream 28045 7480465 ~ 7483755 (+)
XLOC_020147 cela1.4 coding downstream 34447 7486867 ~ 7492548 (+)
XLOC_020148 cela1.5 coding downstream 44899 7497319 ~ 7508894 (+)
XLOC_020136 NA non-coding upstream 570895 6879741 ~ 6881278 (+)
XLOC_020135 NA non-coding upstream 578562 6870291 ~ 6873611 (+)
XLOC_020149 NA non-coding downstream 93404 7545824 ~ 7556620 (+)
XLOC_020151 NA non-coding downstream 223932 7676352 ~ 7972344 (+)
XLOC_020152 NA non-coding downstream 224811 7677231 ~ 7972869 (+)
XLOC_020155 NA non-coding downstream 318497 7770917 ~ 7801971 (+)
XLOC_020157 NA non-coding downstream 469116 7921536 ~ 7929272 (+)
XLOC_020132 NA non-coding upstream 482129 6831773 ~ 6970044 (+)

Expression


Co-expression Network