XLOC_020168 (CABZ01046407.1)


Basic Information

Item Value
gene id XLOC_020168
gene name CABZ01046407.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8489400 ~ 8491260 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040129
CTGTAACAGTGAAGCCAGTGATGGTTGGAGATTCAGTCACTCTAGAAATACAGGGGAACGGGGACATCGAGTGGAAGTTTAAACCCCACAACATACTTATAGCTCACATCAACAGAGATGAAATCACATTGCTTGATGACATTCTTGATGGGGGTTTCAAAGGCAGACTTACGCTGGatcagactggatctctgaccatcaacaaCACCAGAATAACAGACACTGGAGATTATAAAGCAATCATCACCAGCACAGAAATGATACTCCACACATTCCGGCTGACTGTCTATGCTCCTCTTCCTACTCCTGTCATTTCCACCTTAACTCAACACCCAGCTGCATCTCCAGAGTCCAaatgtgtgctgctgtgttcagtggtgaatgtgagcgctgtgagtctctcctggttCAGAGGAAACCGTTTATTATCCAACAccagtgtgtctgatctcagcatcTGCCTCTTTCTACCTCTGGTGGTGGAATATCAGGATAAGAACACCTACAGCTGTGTGGTGAAGAATCCCATCAGAAACCACACCACACATCTGGACACACCCTGTAACACACACTCAGGTATGGTAGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112069

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040129 True 586 mRNA 0.46 2 8489400 8491260

Neighbor

gene id symbol gene type direction distance location
XLOC_020167 CABZ01061501.1 coding upstream 49001 8407707 ~ 8440399 (+)
XLOC_020165 si:dkey-19a16.11 coding upstream 119547 8365905 ~ 8369853 (+)
XLOC_020164 NA coding upstream 132891 8339205 ~ 8356509 (+)
XLOC_020163 CABZ01077217.2 coding upstream 157731 8328377 ~ 8331669 (+)
XLOC_020162 CABZ01077217.1 coding upstream 162428 8313513 ~ 8326972 (+)
XLOC_020169 si:ch73-27e22.7 coding downstream 45578 8536838 ~ 8543629 (+)
XLOC_020170 zmp:0000000984 coding downstream 60553 8551813 ~ 8553791 (+)
XLOC_020171 NA coding downstream 78845 8570105 ~ 8574907 (+)
XLOC_020172 si:ch73-27e22.6 coding downstream 105714 8596974 ~ 8601775 (+)
XLOC_020173 CR450686.1 coding downstream 121202 8612462 ~ 8748801 (+)
XLOC_020161 NA non-coding upstream 174532 8297633 ~ 8314868 (+)
XLOC_020159 CABZ01077220.2 non-coding upstream 223751 8265533 ~ 8265649 (+)
XLOC_020157 NA non-coding upstream 560128 7921536 ~ 7929272 (+)
XLOC_020155 NA non-coding upstream 687429 7770917 ~ 7801971 (+)
XLOC_020174 NA non-coding downstream 130038 8621298 ~ 8761630 (+)
XLOC_020176 CR450686.2 non-coding downstream 203836 8695096 ~ 8699930 (+)
XLOC_020181 NA non-coding downstream 330237 8821497 ~ 8837723 (+)
XLOC_020182 NA non-coding downstream 347165 8838425 ~ 8854534 (+)

Expression


Co-expression Network