XLOC_020204 (BX664625.2)


Basic Information

Item Value
gene id XLOC_020204
gene name BX664625.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 9772754 ~ 9775634 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040180
GTCAGGAAATGTCCCCCTGTTTTTCAATTAAACAGCATCTATTGtcaggttgttgttgttgtggttttgAACACACAGTTATTCATACACTTTGCAACACTGGCAGCTCAGTTAAGAGTTCTCAGAAAGATCTGCTATTTTTAGTTCAGTTTCATTTCATTAGGTGTGAACTCTTCATCCTGCTTTATCTAGTTTACAGGTTTAAGACTTTATAACCCATACAATTTCACATTTTAGTTTGAAGGTTTGAGTAAGCGGTGTACATGGTTGGattacctttgttttgttttttaagtttgaCATAGAATTGTGGAGGCATTTTGAAGAGATGGTTTCAAACGTTGCTGTTTTTTGTCTGTGTATGTTCATCACAAAATGTAAGtggatttcattttattttgtttcaatgTGATCGAGTTTTTATGCAAAGGATTCGAAATgactgacatttaaaaacaaaattaatacatttaaatcaagTTGAATGTAATTGTGGAAATATACTTTAGTAAATACAGGGAAAGTTcaatttaaaaccttttttttaaagatatagcACACTGAATTACAAAAATGATAGTTTCATTGGCAGACAGTATTTTGATGGATTATTTTCAAATATAGTGgtctgattaatttttttttgctttaaaaaagagATCTCAAAACTTCCAATAGCATGATTTGTTTGTAAAgtatacattatataaataaattaactaaattcTACATAGACACACTAATGTCAGTTTATCTTTAAACTCTGAATGAAATCTGAGATTGTGAAtatgtgatttgtttttgtttcttgcaGGTTTTCCTCAAACAAAAGAAACATAGATGATATCAGTGACCGAAGGAGATTCAGTCACGCTAAACACTGGTGTTACTGAAATACAGagtgattattatttaatttggtGGTTTAGGCTTAAAAACACAGACACTCGTATAGCAAAAATCTATAAACAGAGAAACTATATTTATGATGATGAGAATGAGAGTTTCAGACACAGGCTGCAGTTAGATGCaaagactggatctctgaccatcacaaacATCAACAAACTACACTCCGGACTTTATCAAGTACAGATCATTGATAGTGATATCACACACAAGGCTTTCAGTGTTGATGTCTATGgTGTGAAGTCAGCATCAGTAACTGAGGGAGATTCTGTCACTTTAAACACTGATGTCACTGAAATACAAAGCTTTGATCAGATACTGTGGATGTTTGGACCTCGAGAGACTCGTATCGCTGAAATGCACAGGCAGAACATTGACATGTTTGACAGTAATGAGATATTTGGTGACAGACTCAAGATAGACAGTcaaactggatctctgaccatcacaaacATCACAACTGAACTCTCTGGACTTTATAAACTCCATCATAAAACCATCATCAGCAAGAGACTAACTTCCCACCAGAAGTTCACTGTTACTCTCTATGGTCTTTTGCCCGTTCCTGTGATCAGCAGTTACTCTACCACATGTAATACACTGTCATCATTATCTCCATCAGTGTGTAGTTGTTCAGTGGTGTGTTCAGTGTCGAATGTGAGtgctgtgagtctctcctggtacaaaggaaacagtgtattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaaTATCAGGATACAAACACTTACAGCTGTGTGGTCAACAATCCCATCACAAACCGCACCACACATCTGGACATCAGTCAGACCTGCTCACCATGTTCAGACTGTTGTGGTTTTACTGAGGCTGTGATCCGATTGGTCTTTTCCGTTGTACTGGGCATGGTCACTGTTGCAGTGGTGGTTTATGACATCAAATCTGAACGAGCGTATAAAATAACACCAGGTGGCGCTGTTTTCCAACCTAACACTTAGTTTATTATACTGTGTATAAATGGGgcacatggtggctcagtggtaagtaCTGTTGCttaacagcaagaagttcactggttcgagccccggctgggtcagttggtatttctgtgtggagtttgcatgttctccccatgttcacatgggtttcctccaggtgatctggttttccccacagtccaaagacatgtgctataggtgaattgaataccgTAGGGTATGAATGTGAGTGTTAATGAGTgagtatgaatgttttccagtactgggttgcagctggaagggcatcagttgtgtaaaacatatgcttgataagttggcggttcattccgttgtggtgacccctgatgaataaagggactaagcccaaggaaaatgaatgaatgaatattgtagtATTTACTGctcttgttaatgaatgctagaAGCATGATCCATGAAATAATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087444

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040180 True 2359 mRNA 0.38 4 9772754 9775634

Neighbor

gene id symbol gene type direction distance location
XLOC_020203 BX664625.5 coding upstream 4204 9764731 ~ 9768550 (+)
XLOC_020202 BX664625.6 coding upstream 8783 9761930 ~ 9763971 (+)
XLOC_020201 BX664625.1 coding upstream 17643 9751117 ~ 9755111 (+)
XLOC_020200 strip1 coding upstream 234683 9522971 ~ 9538071 (+)
XLOC_020199 cacna2d2b coding upstream 259693 9472814 ~ 9513061 (+)
XLOC_020205 NA coding downstream 7320 9782954 ~ 9791367 (+)
XLOC_020206 si:dkey-102c8.2 coding downstream 18289 9793923 ~ 9795657 (+)
XLOC_020207 si:ch211-236g6.1 coding downstream 31233 9806867 ~ 9808794 (+)
XLOC_020208 BX539307.1 coding downstream 78454 9854088 ~ 9855270 (+)
XLOC_020209 si:dkey-253d23.3 coding downstream 86609 9862243 ~ 9868707 (+)
XLOC_020197 NA non-coding upstream 389270 9359899 ~ 9383484 (+)
XLOC_020196 BX927329.2 non-coding upstream 413351 9351372 ~ 9359403 (+)
XLOC_020195 NA non-coding upstream 429754 9341455 ~ 9343000 (+)
XLOC_020194 NA non-coding upstream 448937 9322757 ~ 9323817 (+)
XLOC_020189 NA non-coding upstream 706336 9066086 ~ 9066418 (+)
XLOC_020211 NA non-coding downstream 111111 9886745 ~ 9904498 (+)
XLOC_020212 NA non-coding downstream 122337 9897971 ~ 9904623 (+)
XLOC_020216 NA non-coding downstream 214271 9989905 ~ 9991494 (+)
XLOC_020219 NA non-coding downstream 243266 10018900 ~ 10049233 (+)

Expression


Co-expression Network