XLOC_020206 (si:dkey-102c8.2)


Basic Information

Item Value
gene id XLOC_020206
gene name si:dkey-102c8.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 9793923 ~ 9795657 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040183
CCAacttgtgtgtgcatgtatgtgtgtgtgtgtgtTTGTATTTATGTTTCAGGTATGTTTGGGGACGCAGATGAAATTAAATCAGTGTTGGTGACTGAGGGAGACTCGGTCCCACTATACACTGATGTTACTGAAGTGAGGGAAGGTGATCAGATATTGTGGAAATTTGGACATCAACGCACTCGAATAGCTGAAATCATGAAAAGGGACCAAATAGGAGTAAACATAAATTTTGTCTTTAATGGTGGAATATTCAAAGACAAATTACAAATGGACAAACacactggatctctgaccatcagaAACATCAGCACTGAACACACTGGACTTTATGAACTGACTGTGATCAGTGAAAAAAACTCAATGAAAAGATTTAATGTCATTGTTTATTCTACTCTACCCATTCCCTTTATCAGCATCAACTCATTAAGCAATTCTTCATCATCTGTATGTTCATCAGACTCCAGATGTTCAGTGTTGTGTTCAGTGTTGAATGTGAGtgctgtgagtctctcctggtacaaaggaaacagtgtattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgGTCAACAACACCATCACAAACCACACCACACATCTGGACATTGAACAACTCTGCCAGACATGTGAAGGTATGAAAGTTAATATTAGtgaattgttgctgtttttgccGAAAAGAAAGTCTAAGTTTGTCTCTTCATGTTCAATATACAGAGTTGAGCCAGAGTATATACTTTCCCTTGATTGTAATTGCCAGCATGTGTCTGTTGGTGCTTACATCTGCTGTTTGTTGTTGCAGCAGGAGGTGTCAACAAGCACAACAAAAGGGcgagtattatatttaaaattatataaatga

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-329 No description available

Ensembl:

ensembl_id ENSDARG00000112361

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040183 True 921 mRNA 0.39 3 9793923 9795657

Neighbor

gene id symbol gene type direction distance location
XLOC_020205 NA coding upstream 2556 9782954 ~ 9791367 (+)
XLOC_020204 BX664625.2 coding upstream 18289 9772754 ~ 9775634 (+)
XLOC_020203 BX664625.5 coding upstream 25373 9764731 ~ 9768550 (+)
XLOC_020202 BX664625.6 coding upstream 29952 9761930 ~ 9763971 (+)
XLOC_020201 BX664625.1 coding upstream 38812 9751117 ~ 9755111 (+)
XLOC_020207 si:ch211-236g6.1 coding downstream 11210 9806867 ~ 9808794 (+)
XLOC_020208 BX539307.1 coding downstream 58431 9854088 ~ 9855270 (+)
XLOC_020209 si:dkey-253d23.3 coding downstream 66586 9862243 ~ 9868707 (+)
XLOC_020210 si:dkey-253d23.4 coding downstream 75581 9871238 ~ 9880408 (+)
XLOC_020211 NA coding downstream 91088 9886745 ~ 9904498 (+)
XLOC_020197 NA non-coding upstream 410439 9359899 ~ 9383484 (+)
XLOC_020196 BX927329.2 non-coding upstream 434520 9351372 ~ 9359403 (+)
XLOC_020195 NA non-coding upstream 450923 9341455 ~ 9343000 (+)
XLOC_020194 NA non-coding upstream 470106 9322757 ~ 9323817 (+)
XLOC_020212 NA non-coding downstream 102314 9897971 ~ 9904623 (+)
XLOC_020216 NA non-coding downstream 194248 9989905 ~ 9991494 (+)
XLOC_020219 NA non-coding downstream 223243 10018900 ~ 10049233 (+)
XLOC_020221 NA non-coding downstream 277763 10073420 ~ 10097227 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000030_08450632_08457703 NA coding CI01000030 null 8450176 ~ 8457975 (-)