XLOC_020215 (BX539307.2)


Basic Information

Item Value
gene id XLOC_020215
gene name BX539307.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 9981079 ~ 9984032 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040196
TGGTCAGACAAGCAGGAGCAAATGGCACAAAAAGGGGTGATCCAATAGAGTAAAACCTTGCTCACACTGTGGGATTTCAGCCACGATTTAGTCGTCTAATACAaatttgagaaactgaaatagattcCTAAAATCATAGGCTAACAAGGACAGCCACTATTGACAGTTATAATCAGATTTCCCCTCTGATGAAGTTCTGAAACTGacattatgacagctgagatcttacagtgtgacatgggaacCAACTGTGGGAGCACATGCATATGCAGATGACCCAGCCGGgcctcgaatcagtgaccttcttgctgagaggtgattgtgctacgtactgcaccaccgtgacgcccatgCTACAGTTGTTTAGGATTATAAAAAATTGCAGAAAGACAGTCATTAGCTACGTTTCTATCCAATCATAACTTTTGTAAATGCGTCTGCACTCTGCATCCCATGACTTCAAACGCTACCACATGTTCATTGCGTCAGCATCGTCTTCTGAGGCATCAACTttgcttttaaacaaaacaaagcttctcctaccacagtaaattcagtttttactttagatttttagcaccagttaatcaggaagtcacaattttatttaaattgactcgttggatgaaaacactgctttatgcgcacgtcttttatgcgatacgtcagttttgcgcatacatttaattcgctTTTTTATGTCTGAGGTGAATATTTCAATGATTCTGGGTCAGTAACctataaaattgttttaaattatgctGTGATTGTGTTTTGATTCTCATACAGACATAACAAAAACTCCAGTTTCAGTGACTGCAGAAGAATCTGTCACTCTACACTCTAACCTTACAAAAGAACAAAAAGGGATTCATGTCATGTGGATGTTTGAATGTAATCCTAATGGAATGAGTCTGGTTGCTGAAATCCTTAATAACATAACCTCAAAATCTGACTGTGATGATGGGAGATTCAAAGACAGACTGCATATAGACAGTCAGACTGGAGATCTCACGATCACAAACAGCAGCAAAACAGACTCTGGAGTCTTTAAACTACAGATCAACAATGGAGTCTCCAAATGCTGGAGTTTTAATCTTTCTGTCTATGCTCTGCTCCCTGTTCCTGTCATCACCAGACacttttcatcatcatcatcagactCCAGATGTTCAGTGttgtgttcagtggtgaatgtgagtgctgtgagtctctcctggtacaaaggaaacagtgtattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaaCATCAGGATAACAACAACTACAGCTGTGTGGTCAACAATGCCATCAGAAATCAGACCACACATCTGGACATCAGTCAACTCTGTCCTGATTTGCCAGGCCAGAGAACTCTCATTAAGACAATAGGTGGGGTGGTTGTTGTTGCTCTTGTCCTTGTCTCTGCAGTGATATATTGTCTCTACAAACATTGCACAACAAGAGAAGGCAAGTATTACCTACAGCTGAAATATGGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000086095

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040196 True 1529 mRNA 0.41 3 9981079 9984032

Neighbor

gene id symbol gene type direction distance location
XLOC_020214 zgc:171686 coding upstream 35442 9939901 ~ 9945637 (+)
XLOC_020213 blf coding upstream 57387 9917007 ~ 9923692 (+)
XLOC_020212 NA coding upstream 76456 9897971 ~ 9904623 (+)
XLOC_020211 NA coding upstream 76581 9886745 ~ 9904498 (+)
XLOC_020210 si:dkey-253d23.4 coding upstream 100671 9871238 ~ 9880408 (+)
XLOC_020216 NA coding downstream 5873 9989905 ~ 9991494 (+)
XLOC_020217 BX324216.1 coding downstream 10801 9994833 ~ 10006999 (+)
XLOC_020218 BX324216.4 coding downstream 26260 10010292 ~ 10014369 (+)
XLOC_020219 NA coding downstream 34868 10018900 ~ 10049233 (+)
XLOC_020220 si:ch211-222k6.3 coding downstream 82814 10066846 ~ 10071296 (+)
XLOC_020205 NA non-coding upstream 189712 9782954 ~ 9791367 (+)
XLOC_020197 NA non-coding upstream 597595 9359899 ~ 9383484 (+)
XLOC_020196 BX927329.2 non-coding upstream 621676 9351372 ~ 9359403 (+)
XLOC_020221 NA non-coding downstream 89388 10073420 ~ 10097227 (+)
XLOC_020223 NA non-coding downstream 174431 10158463 ~ 10164865 (+)
XLOC_020226 NA non-coding downstream 230962 10214994 ~ 10222660 (+)

Expression


Co-expression Network