Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944147 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 89647462 ~ 89647514 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039453.1 | True | 53 | mRNA | 0.40 | 1 | 89647462 | 89647514 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499346 | vps4a | coding | downstream | 38884 | 89606837 ~ 89609890 (-) |
| LOC110499327 | LOC106561534 | coding | downstream | 60317 | 89577794 ~ 89587145 (-) |
| lsm14aa | LOC106561533 | coding | downstream | 92107 | 89538498 ~ 89555355 (-) |
| gpia | LOC100196524 | coding | downstream | 118658 | 89506624 ~ 89528804 (-) |
| hsd17b2 | hsd17b2 | coding | downstream | 141477 | 89502075 ~ 89505985 (-) |
| tph2 | tph2 | coding | upstream | 92675 | 89740189 ~ 89748145 (-) |
| LOC110499378 | LOC106561541 | coding | upstream | 104229 | 89751743 ~ 89763372 (-) |
| LOC110499401 | lgr5 | coding | upstream | 145605 | 89793119 ~ 89820854 (-) |
| LOC110499439 | LOC106561546 | coding | upstream | 253993 | 89901507 ~ 89922720 (-) |
| LOC110499460 | LOC100136366 | coding | upstream | 397182 | 90044696 ~ 90125003 (-) |
| G201561 | NA | non-coding | downstream | 52447 | 89594592 ~ 89595015 (-) |
| G201544 | NA | non-coding | downstream | 70037 | 89573954 ~ 89577425 (-) |
| G201540 | LOC106561532 | non-coding | downstream | 88424 | 89558299 ~ 89559038 (-) |
| G201515 | NA | non-coding | downstream | 179314 | 89463194 ~ 89468148 (-) |
| G201506 | NA | non-coding | downstream | 195811 | 89451242 ~ 89451651 (-) |
| G201627 | NA | non-coding | upstream | 28517 | 89676031 ~ 89677465 (-) |
| G201667 | LOC106561542 | non-coding | upstream | 127985 | 89775499 ~ 89777092 (-) |
| G201664 | LOC106561542 | non-coding | upstream | 131588 | 89779102 ~ 89780286 (-) |
| G201673 | LOC106561542 | non-coding | upstream | 134280 | 89781794 ~ 89785665 (-) |
| G201671 | LOC106561542 | non-coding | upstream | 141372 | 89788886 ~ 89789501 (-) |
| G198912 | NA | other | downstream | 2320993 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 2743506 | 86903036 ~ 86903956 (-) |
| G197554 | NA | other | downstream | 3683797 | 85959845 ~ 85963665 (-) |
| G197498 | slc25a18 | other | downstream | 3803969 | 85831239 ~ 85843493 (-) |
| G202279 | NA | other | upstream | 730043 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 1941698 | 91589212 ~ 91591049 (-) |
| G204024 | NA | other | upstream | 2139673 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 2750546 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 3314530 | 92962044 ~ 92962934 (-) |
