Gene
RNA
| Item | Value |
|---|---|
| gene id | G113745 |
| gene name | echdc1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 11393468 ~ 11393896 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| echdc1 | Predicted to enable carboxy-lyase activity. Predicted to be located in cytosol. Orthologous to human ECHDC1 (ethylmalonyl-CoA decarboxylase 1). |
| description |
|---|
| ethylmalonyl-CoA decarboxylase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU130197 | True | 390 | lncRNA | 0.42 | 2 | 11393468 | 11393896 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prelid3a | LOC106593866 | coding | downstream | 131959 | 11196145 ~ 11261793 (-) |
| lratd2b | LOC106573048 | coding | downstream | 224830 | 11165113 ~ 11168638 (-) |
| LOC118937688 | NA | coding | downstream | 333995 | 11058263 ~ 11060049 (-) |
| LOC110511734 | LOC105023503 | coding | downstream | 392346 | 10840566 ~ 11001122 (-) |
| LOC110514530 | LOC106572903 | coding | upstream | 4196 | 11398092 ~ 11402862 (-) |
| LOC110513475 | LOC106592216 | coding | upstream | 78043 | 11471939 ~ 12290710 (-) |
| LOC118937712 | NA | coding | upstream | 190312 | 11584208 ~ 11585455 (-) |
| LOC118937710 | NA | coding | upstream | 191663 | 11585559 ~ 11586577 (-) |
| LOC118937716 | NA | coding | upstream | 565383 | 11959279 ~ 11960863 (-) |
| G113744 | NA | non-coding | downstream | 10034 | 11382177 ~ 11383434 (-) |
| G113743 | NA | non-coding | downstream | 18689 | 11374552 ~ 11374779 (-) |
| G113742 | NA | non-coding | downstream | 19863 | 11373365 ~ 11373605 (-) |
| G113741 | NA | non-coding | downstream | 20462 | 11371263 ~ 11373006 (-) |
| G113737 | NA | non-coding | downstream | 24473 | 11366813 ~ 11368995 (-) |
| G113749 | NA | non-coding | upstream | 4702 | 11398598 ~ 11400014 (-) |
| G113758 | NA | non-coding | upstream | 20760 | 11414656 ~ 11414907 (-) |
| G113761 | NA | non-coding | upstream | 24014 | 11417910 ~ 11419517 (-) |
| G113762 | NA | non-coding | upstream | 27159 | 11421055 ~ 11422757 (-) |
| G113767 | NA | non-coding | upstream | 35805 | 11429701 ~ 11430062 (-) |
| G113733 | LOC106606124 | other | downstream | 40727 | 11349342 ~ 11352741 (-) |
| G113720 | NA | other | downstream | 67856 | 11323041 ~ 11325612 (-) |
| G113712 | NA | other | downstream | 80810 | 11310843 ~ 11312658 (-) |
| G113688 | NA | other | downstream | 175314 | 11210473 ~ 11218154 (-) |
| G113096 | NA | other | downstream | 371734 | 11021041 ~ 11021734 (-) |
| G114390 | NA | other | upstream | 1190131 | 12584027 ~ 12585140 (-) |
| G114402 | NA | other | upstream | 1216773 | 12610669 ~ 12613680 (-) |
| G114424 | NA | other | upstream | 1313931 | 12707827 ~ 12709315 (-) |
| G114442 | NA | other | upstream | 1341418 | 12735314 ~ 12739157 (-) |
