Gene
RNA
| Item | Value |
|---|---|
| gene id | G122844 |
| gene name | LOC106593652 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 21989901 ~ 21993504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rho guanine nucleotide exchange factor 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU141909 | True | 370 | lncRNA | 0.53 | 4 | 21989901 | 21993504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537643 | LOC106605567 | coding | downstream | 268266 | 21713005 ~ 21721635 (-) |
| cnfn | LOC106605555 | coding | downstream | 342415 | 21645294 ~ 21647486 (-) |
| LOC110534450 | LOC106605556 | coding | downstream | 356256 | 21631390 ~ 21633645 (-) |
| LOC118944069 | LOC106605559 | coding | downstream | 393366 | 21595236 ~ 21596535 (-) |
| LOC110534443 | LOC106605563 | coding | downstream | 395431 | 21586978 ~ 21594470 (-) |
| LOC110537847 | mrpl17 | coding | upstream | 122145 | 22114700 ~ 22118083 (-) |
| LOC110537842 | NA | coding | upstream | 127075 | 22120579 ~ 22157534 (-) |
| LOC110537803 | LOC106577461 | coding | upstream | 179188 | 22172692 ~ 22175353 (-) |
| LOC110537752 | LOC106577440 | coding | upstream | 188341 | 22180756 ~ 22198840 (-) |
| LOC110537877 | LOC106577478 | coding | upstream | 236296 | 22229800 ~ 22234924 (-) |
| G122795 | NA | non-coding | downstream | 95440 | 21894131 ~ 21894461 (-) |
| G122762 | NA | non-coding | downstream | 132808 | 21856853 ~ 21857093 (-) |
| G122761 | LOC106578847 | non-coding | downstream | 133488 | 21851433 ~ 21856413 (-) |
| G122731 | LOC106605715 | non-coding | downstream | 153168 | 21836195 ~ 21836733 (-) |
| G122742 | NA | non-coding | downstream | 202393 | 21786955 ~ 21787508 (-) |
| G122830 | arhgef1 | non-coding | upstream | 18460 | 22011964 ~ 22014502 (-) |
| G122849 | NA | non-coding | upstream | 21216 | 22014720 ~ 22015287 (-) |
| G122860 | LOC106584637 | non-coding | upstream | 57919 | 22051423 ~ 22056137 (-) |
| G122909 | NA | non-coding | upstream | 109664 | 22103168 ~ 22104400 (-) |
| G122733 | LOC106592382 | other | downstream | 177469 | 21796507 ~ 21812432 (-) |
| G121756 | NA | other | downstream | 442864 | 21490267 ~ 21547037 (-) |
| G121738 | NA | other | downstream | 526871 | 21462693 ~ 21463030 (-) |
| G121533 | LOC106583873 | other | downstream | 643214 | 21288616 ~ 21346687 (-) |
| G122829 | LOC106605673 | other | upstream | 32795 | 22026299 ~ 22027717 (-) |
| G122972 | NA | other | upstream | 382649 | 22376153 ~ 22378160 (-) |
| G123308 | NA | other | upstream | 1011482 | 23004986 ~ 23005812 (-) |
| G123435 | NA | other | upstream | 1192136 | 23185640 ~ 23199252 (-) |
