XLOC_021111 (si:dkey-3k20.1)


Basic Information

Item Value
gene id XLOC_021111
gene name si:dkey-3k20.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 20729063 ~ 20733822 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041469
CAAAAATTAGCAAAGTCTTGATGGCCATGGAACGAGGACAGCTTTCACAGTTTAAAGGACAGAATTTGGATGAAATCCAGATTGATCCCCAAGAGAAACTTTTGCTGGACAGTGATGGATCCGAGTCTGAAGATGAGATTGAGTCAACTGGAAATGGTGCCTCACCTTCAAATTCAGCAGAAATCAAAGAAGTCTGCTGAGGTTGGACAACACCAAGAACCATCCAAAGGAGGCAAGAATCCTAAAAAACTGCAGCCGACTAGCAAGGACTTGCCGGAACCGCACAGAACAAAGAGATCTTCACAAAACGAGCGAAGAAGGTGGTCTTTGGAGGAGATCAAGGCCGTGGAGAAGACAATGATGGAATTCATAATGTCTGGAAAGGTTCCTGGTAAAGCCCAGTGCATGAACTGTATCGAAAGTTCCCCAGCAGCACTTCAAAATAGAAGTTGGGAGGGGGtgaaattttatgtaaaaaatcgCATTGATTCCCTAAAGAAAAAATTGTGAAAGGTAAGGACCTtcatctaattatttttttcGTGTTTGCCGGAAGAAAGAAaatttattacttaaaaaaatgtgaaaggtAGGTGAAAGGGCCTtcaccactgttttttttttcatgattgtTGAAAGCAACAAGTTTGATTTCgttaaagcaaaaaaatgtaaaagggcCTTCACCAGTTTTGTCTTTGTTAAAGGCAACATGTATGTGAATCTTGTTTAAGCAAACTCAACATGCATCTGCTTAAAGAGCAGTATACTAAAACGTTcatgttaacatttaaataaatgtttaaaacactaaaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-745 No description available

Ensembl:

ensembl_id ENSDARG00000092274

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041469 True 816 mRNA 0.39 5 20729063 20733822

Neighbor

gene id symbol gene type direction distance location
XLOC_021110 oaz1a coding downstream 8636 20714624 ~ 20720427 (-)
XLOC_021109 org coding downstream 33826 20689958 ~ 20695237 (-)
XLOC_021108 lingo3a coding downstream 153384 20573862 ~ 20575679 (-)
XLOC_021107 NA coding downstream 181523 20522204 ~ 20547540 (-)
XLOC_021105 atp8b3 coding downstream 213716 20473229 ~ 20515347 (-)
XLOC_021112 amh coding upstream 13360 20747182 ~ 20761759 (-)
XLOC_021113 dot1l coding upstream 49093 20782915 ~ 20838011 (-)
XLOC_021114 ell coding upstream 113758 20847580 ~ 20924747 (-)
XLOC_021115 fkbp8 coding upstream 192027 20925849 ~ 20950448 (-)
XLOC_021116 ssbp4 coding upstream 217389 20951211 ~ 21046843 (-)
XLOC_021106 BX088720.1 non-coding downstream 238506 20490441 ~ 20490557 (-)
XLOC_021094 NA non-coding downstream 1091034 19622740 ~ 19638029 (-)
XLOC_021093 NA non-coding downstream 1126601 19598045 ~ 19602462 (-)
XLOC_021090 BX936298.1 non-coding downstream 1299139 19429806 ~ 19429924 (-)
XLOC_021117 CU693455.1 non-coding upstream 385080 21118902 ~ 21119016 (-)
XLOC_021118 NA non-coding upstream 386074 21119896 ~ 21121096 (-)
XLOC_021124 NA non-coding upstream 810388 21544210 ~ 21547893 (-)
XLOC_021128 BX649295.1 non-coding upstream 1199303 21933125 ~ 21937488 (-)
XLOC_021129 NA non-coding upstream 1216880 21950702 ~ 21955166 (-)

Expression


Co-expression Network