G141003 (LOC106605098)


Basic Information

Item Value
gene id G141003
gene name LOC106605098
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39250265 ~ 39251111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162048
TGGAATTTAAAAATGGTTACAGTAAGGATCCCAGAAAGAACTAACCTGGCCATAAATAGTTTGAGTTTTAGTCAGGCACTAACCTGGCCACccaggcattggtgtttatgttGAAGGAGGCGATGGTGCCTGTGAAAAGGGGTGTGGTCTCAAACGTCCACACCTTCATATTTGCACAGGCGTCCCATTGGTGCTCGCCATTCTGACCCAGCCCATTATAGCCGAGCCCAGAGAGTATACAGACGCCCTCCGCTATGACCCAGCAGCTCACATATTTGTACAGGATGACTTTGGCCCAAAGGAGGATGAAGACACAGCGGTACCAGAACGGCTGCGCGTCGTACTCATCTGTTAGGTAATAGCTATCTGGGTAGTGCGGACTAAATATTGCGTAGATCACCAGGCAGAGGAGGCCGAGGGAGAACCGCTTCATAGCAGGTATA

Function

NR:

description
lysophospholipid acyltransferase 5-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162048 True 443 lncRNA 0.50 3 39250265 39251111

Neighbor

gene id symbol gene type direction distance location
LOC110489325 tpi1b coding downstream 16496 39228812 ~ 39233769 (-)
LOC118939935 LOC106605099 coding downstream 29625 39218551 ~ 39220640 (-)
LOC110489287 LOC106605101 coding downstream 40759 39197666 ~ 39209506 (-)
LOC110489261 LOC106605105 coding downstream 266293 38975605 ~ 38983972 (-)
LOC110489249 LOC106605107 coding downstream 286485 38952824 ~ 38963780 (-)
LOC110489429 LOC106605091 coding upstream 87078 39338189 ~ 39347511 (-)
LOC110489468 LOC106605089 coding upstream 99821 39350932 ~ 39365872 (-)
LOC100301666 LOC100301666 coding upstream 159137 39410248 ~ 39412570 (-)
LOC110489516 LOC106605085 coding upstream 191195 39442306 ~ 39449334 (-)
si:ch211-154o6.3 LOC106605084 coding upstream 198384 39449495 ~ 39465606 (-)
G140997 LOC106605098 non-coding downstream 2094 39240917 ~ 39248171 (-)
G140963 NA non-coding downstream 53721 39196230 ~ 39196544 (-)
G140907 NA non-coding downstream 54984 39192136 ~ 39195281 (-)
G140958 NA non-coding downstream 84842 39164972 ~ 39165423 (-)
G140957 NA non-coding downstream 86624 39163385 ~ 39163641 (-)
G141046 NA non-coding upstream 75999 39327110 ~ 39327389 (-)
G141061 NA non-coding upstream 137610 39388721 ~ 39388929 (-)
G141073 NA non-coding upstream 148512 39399623 ~ 39399857 (-)
G141077 LOC100136501 non-coding upstream 152946 39404057 ~ 39405450 (-)
G141079 NA non-coding upstream 169701 39420812 ~ 39421138 (-)
G140879 NA other downstream 185847 39063862 ~ 39064418 (-)
G140479 NA other downstream 422070 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 1201599 38046700 ~ 38048666 (-)
G139231 NA other downstream 1497307 37747441 ~ 37752958 (-)
LOC110501508 LOC106605132 other downstream 1786507 37442359 ~ 37463839 (-)
G141363 LOC106605077 other upstream 512822 39763933 ~ 39765473 (-)
LOC110489653 LOC106605072 other upstream 973511 40224622 ~ 40298333 (-)
G142918 NA other upstream 1612103 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 2463435 41714269 ~ 41730507 (-)
G145010 NA other upstream 3455707 42706818 ~ 42707279 (-)

Expression


Co-expression Network