G141081


Basic Information

Item Value
gene id G141081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39422834 ~ 39426434 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU162133
AGCCATTGAAGCAACCACTCTGAACGGCAGTAGTCTGGCACGGATCACTATGAGGACTGAACCGGTTAAGATGTTGTTGTCGGGTAATCATTCAGAGTTTATCTCCTTCTTCATTCTGTCCTCGCCCCATGTTCCTCTGGTTCTTGGTTACCCCTGGCTGAAGGAACACAATCCCTCGTTTGATTGGGTGACGGGTAAGGTAACTAGTTGGAGCATTGATTGTCATGCTAACTGTCTTAGGACTccgggtagtccgcttcataagcccggacctgacatccattccctgccggatcgttagccatgaacagtatgttgtgccagagtatcagcctcaagttggatagaatttgttttgttgtttgttacgtattgcttgccttgaacttacctccgtttgttctgtcttcagttactcacccggatcatttaccccattcccgcctggtcttcggaggattccgcttccccattggatccacctatttactcccatcaactcaccaccgctacccgctacgccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162133 True 525 lncRNA 0.50 3 39422834 39426434

Neighbor

gene id symbol gene type direction distance location
LOC100301666 LOC100301666 coding downstream 10264 39410248 ~ 39412570 (-)
LOC110489468 LOC106605089 coding downstream 56962 39350932 ~ 39365872 (-)
LOC110489429 LOC106605091 coding downstream 75323 39338189 ~ 39347511 (-)
LOC110489325 tpi1b coding downstream 189065 39228812 ~ 39233769 (-)
LOC118939935 LOC106605099 coding downstream 202194 39218551 ~ 39220640 (-)
LOC110489516 LOC106605085 coding upstream 15872 39442306 ~ 39449334 (-)
si:ch211-154o6.3 LOC106605084 coding upstream 23061 39449495 ~ 39465606 (-)
LOC110501545 NA coding upstream 61121 39487555 ~ 39497561 (-)
LOC118940039 NA coding upstream 73303 39499737 ~ 39501488 (-)
nr0b2a LOC106605079 coding upstream 127369 39553803 ~ 39555433 (-)
G141079 NA non-coding downstream 1696 39420812 ~ 39421138 (-)
G141077 LOC100136501 non-coding downstream 17384 39404057 ~ 39405450 (-)
G141073 NA non-coding downstream 22977 39399623 ~ 39399857 (-)
G141061 NA non-coding downstream 33905 39388721 ~ 39388929 (-)
G141046 NA non-coding downstream 95445 39327110 ~ 39327389 (-)
G141082 NA non-coding upstream 1113 39427547 ~ 39427779 (-)
G141090 NA non-coding upstream 43226 39469660 ~ 39469876 (-)
G141091 NA non-coding upstream 43968 39470402 ~ 39470760 (-)
G141108 NA non-coding upstream 90088 39516522 ~ 39550549 (-)
G141138 NA non-coding upstream 129524 39555958 ~ 39556282 (-)
G140879 NA other downstream 358416 39063862 ~ 39064418 (-)
G140479 NA other downstream 594639 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 1374168 38046700 ~ 38048666 (-)
G139231 NA other downstream 1669876 37747441 ~ 37752958 (-)
LOC110501508 LOC106605132 other downstream 1959076 37442359 ~ 37463839 (-)
G141363 LOC106605077 other upstream 337499 39763933 ~ 39765473 (-)
LOC110489653 LOC106605072 other upstream 798188 40224622 ~ 40298333 (-)
G142918 NA other upstream 1436780 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 2288112 41714269 ~ 41730507 (-)
G145010 NA other upstream 3280384 42706818 ~ 42707279 (-)

Expression


Co-expression Network