XLOC_021436 (mybl2a)


Basic Information

Item Value
gene id XLOC_021436
gene name mybl2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 4348265 ~ 4357768 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042615
CAAGGCGGAGCGCAGATATGACGCACTAGAACACAGAAGCTGTGCGCGCGGGCTCACTGGGCAGCAGTTGGAGGTTACACAAGTGAGGCGcacaaaaccacacacacaaacaagagtCTGCGGACGATTAAACATAACAACACCCCACAAAACTGTGCGGTTTCCTCCTGAACTATCCGTTACGTTGTCGCAACCTCTGGACGACTTCGGAGACATGCACAGGTTCAGTAAACTTATCCAGTGGTTCATTTAAGTCATCTCATAGAAGTGCAGCTGCTTAAAAGAGTAATGGAGACTAAAGTAAATCTTAAAACTAAGTGTGGGACTGATCTCGAGTCTGAGATGGATGAGGATATTGAGCGAACAAAGAGCAAATGGACATCAGCAGAGGATGAAAGTCTTGCAGCCCTGGTGGGGAAGTATGGAAGGAGACAGTGGGAACTGATATCATGCTCTCTACCTGGACGCACTGCGCAGGACTGTAAATACAGATTCACGGTTGTCTTAGATCCTGAGCTTGTTAAGGGAACCTGGACTAAAGAAGAAGATGAaaagCTCATTCAGCTGGTGTCCTTGTATGGTGACAAGTCATGGAGCATAATTTCAAAGAACCTAAAAGGGCGAAGAGGCAAGCAGTGCAGAGAGCGATGGCACAATCATCTGGACCCGTCTGTCATCAAGACACCCTGGACGGCAGCGGAGGATCTAATAATCATAAAATGCCATTGTTTGCTGGGATCCCGTTGGGCACAAATAGCAAAGTTTCTCCCAGGAagGACTGATAATTCGATCAAGAACCATTGGTATTCCACCTTAAAGCGTAAAATGGAGAGGGGCACCTACAAGATGGAGAGTCTTGATTTGAGTGATCTTGGACACCACCAGAAATCCAAGGAAACATCTACTTCGTCAAGTCCTGAAAAGTTGAAGAGCACACCAGAACCATTGTCTAAAACGAAACCGACGAAGAGCATGTTTTTAGAAAACAGCCTGAAGGCCAACGGTCCGCCCCTCTACAATTGCTCCTCTTCACCCTCCAGCTCCAGCAGCCCTCCCACTGTGCCCCCTCAACATAAAGCATATGTTGATGATGTTTTGCAAATGATTGCTGAGGACATGCTACCGCTAAACTTTTGTGAAGGCTGTGGGTTTCGTAAATTCATGAGTTCCGTTGGCCCTCAGCACCCACAGCTCTCGCAGCAGATGATAGCGTCACACCTGTATAATGAAGTGGAGAAGACCATCAAACCTCGGCTGATCCGGCAGCTCAGAAACTGCATATCTCTGAGCGTAGGCCATAATGTCGTTCACGTCACTGCCGACATCTGGGCGAACGAACACACAGAAACTCTTCTAGCCGTCCAGTTGCACTTTCTCGATGACGACTGGAACCTTCACAGGCCTACTGTGGCTTTTCGTCACTTGTCGAGTAAAGAATTGAATACAACAAGAATTGGCGAAGTTGAATCGGTTCTGTTAAGCTACGGGCTTTTCCCCCATAACATTGGTTATAGTATGATCCACGAAGCCAAGAACACTATTTCTACACACGATCTCTTCTGTGACTACAAAATCATGTATTCTGCACAGAAGAACGATCCGGACGAAGATGAATTATTGCGTTTTCTTGACGATCAGGTCGCCATCGATGATTTCTCCATAGCTGAGATGTCATCCACCAAACATCTGGACTGCATAACGACTCTGCTTCATTGCGTAATAAAGGGCGCATTGAGGAAGTCAAGAGTGGTTGAGCGAATACTTTTTGAGGTACAAAGTGTAGTGTCTTTTTTTCGCCGCAGTCCCTACTGGCTAGATGTTCTTACCAAGAAGTGTAAGCTCTCGCTATGCGGCTCTTACAGCACAAGTAGTCTTACCTGGAACTCTACCATCAGTATCATTCGAGAGATGATGCAGGAGTCAGTTTGGGACACCGTGATGGCTGTTCTGATTCAGGCACGCACCGAGGCAAACCACTGTCACATCTCTCCACCAGCAATTCATGTTGCGCGAGAGCAAGTCGTGGATCTGGTTACCTTGCTAGAGCCTTTTGAAGAGGTGGTCCAGTTGCTTCAGGATGATGGCATAACCCTGTCTCTCATCATCCCTTCCATCATCGGACTCGATAAAACACTAGAGATCAAGGACACAAAGTTTAGCCTCTTTTGCTCAGCCTTGCGCTGTGGACTTCGTACTTACTTCCAGCCTCTAATATTGCGAAGCGATCTGTTGCTAGCCACCGTCCTGGACCCACGAATTAAGCTGCAACCCTTCGACTGTGAAAAAGAGCAATTCAAAAGCACCTTGCTGTTTGTTCCTTCTAAACAGCGCGTGTCTTCGGTTGTAGAGTCGGCATTAGGGGACGCATACACTGCTGCAGAAATGAGCTGTGACAAAACTGCGGATTTACAGTCGTCAATAGTGCAGGAGCTGCATCATTATTTATCAGAACCCTTGGCGGATGGCAGCGTTTCTTTACAGGACTTCTGGAAAGGAGCGGCACGCTTCTCTCAGCTACAAAGCGTTTGCCGGACACTGTTGGCGGTCCCGGCTTCTTCAGGAGGATTTCGGAGACTGTTTCCTCTAGCGTCTCGTATTGTTCGTGCTCAGAGAAGCCGGCTGCCGCAGCATACGACAGAAAGACTCCTGCTGTATCGAGAGTCTCTGAAGAACAGCGGCAGAAGTGAAAAACAttgagcttttttttctttttaaaataactacaaatatatgatttttttattattattaaaattatggaGTGACTTTTCATGATCATGTCACAATAAAACTGTCATTGTCAAGCTTCA
>TCONS_00042616
ATGCACAGAGTAATGGAGACTAAAGTAAATCTTAAAACTAAGTGTGGGACTGATCTCGAGTCTGAGATGGATGAGGATATTGAGCGAACAAAGAGCAAATGGACATCAGCAGAGGATGAAAGTCTTGCAGCCCTGGTGGGGAAGTATGGAAGGAGACAGTGGGAACTGATATCATGCTCTCTACCTGGACGCACTGCGCAGGACTGTAAATACAGATTCACGGTTGTCTTAGATCCTGAGCTTGTTAAGGGAACCTGGACTAAAGAAGAAGATGAaaagCTCATTCAGCTGGTGTCCTTGTATGGTGACAAGTCATGGAGCATAATTTCAAAGAACCTAAAAGGGCGAAGAGGCAAGCAGTGCAGAGAGCGATGGCACAATCATCTGGACCCGTCTGTCATCAAGACACCCTGGACGGCAGCGGAGGATCTAATAATCATAAAATGCCATTGTTTGCTGGGATCCCGTTGGGCACAAATAGCAAAGTTTCTCCCAGGAagGACTGATAATTCGATCAAGAACCATTGGTATTCCACCTTAAAGCGTAAAATGGAGAGGGGCACCTACAAGATGGAGAGTCTTGATTTGAGTGATCTTGGACACCACCAGAAATCCAAGGAAACATCTACTTCGTCAAGTCCTGAAAAGTTGAAGAGCACACCAGAACCATTGTCTAAAACGAAACCGACGAAGAGCATGTTTTTAGAAAACAGCCTGAAGGCCAACGGTCCGCCCCTCTACAATTGCTCCTCTTCACCCTCCAGCTCCAGCAGCCCTCCCACTGTGCCCCCTCAACATAAAGCATATGTTGATGATGTTTTGCAAATGATTGCTGAGGACATGCTACCGCTAAACTTTTGTGAAGGCTGTGGGTTTCGTAAATTCATGAGTTCCGTTGGCCCTCAGCACCCACAGCTCTCGCAGCAGATGATAGCGTCACACCTGTATAATGAAGTGGAGAAGACCATCAAACCTCGGCTGATCCGGCAGCTCAGAAACTGCATATCTCTGAGCGTAGGCCATAATGTCGTTCACGTCACTGCCGACATCTGGGCGAACGAACACACAGAAACTCTTCTAGCCGTCCAGTTGCACTTTCTCGATGACGACTGGAACCTTCACAGGCCTACTGTGGCTTTTCGTCACTTGTCGAGTAAAGAATTGAATACAACAAGAATTGGCGAAGTTGAATCGGTTCTGTTAAGCTACGGGCTTTTCCCCCATAACATTGGTTATAGTATGATCCACGAAGCCAAGAACACTATTTCTACACACGATCTCTTCTGTGACTACAAAATCATGTATTCTGCACAGAAGAACGATCCGGACGAAGATGAATTATTGCGTTTTCTTGACGATCAGGTCGCCATCGATGATTTCTCCATAGCTGAGATGTCATCCACCAAACATCTGGACTGCATAACGACTCTGCTTCATTGCGTAATAAAGGGCGCATTGAGGAAGTCAAGAGTGGTTGAGCGAATACTTTTTGAGGTACAAAGTGTAGTGTCTTTTTTTCGCCGCAGTCCCTACTGGCTAGATGTTCTTACCAAGAAGTGTAAGCTCTCGCTATGCGGCTCTTACAGCACAAGTAGTCTTACCTGGAACTCTACCATCAGTATCATTCGAGAGATGATGCAGGAGTCAGTTTGGGACACCGTGATGGCTGTTCTGATTCAGGCACGCACCGAGGCAAACCACTGTCACATCTCTCCACCAGCAATTCATGTTGCGCGAGAGCAAGTCGTGGATCTGGTTACCTTGCTAGAGCCTTTTGAAGAGGTGGTCCAGTTGCTTCAGGATGATGGCATAACCCTGTCTCTCATCATCCCTTCCATCATCGGACTCGATAAAACACTAGAGATCAAGGACACAAAGTTTAGCCTCTTTTGCTCAGCCTTGCGCTGTGGACTTCGTACTTACTTCCAGCCTCTAATATTGCGAAGCGATCTGTTGCTAGCCACCGTCCTGGACCCACGAATTAAGCTGCAACCCTTCGACTGTGAAAAAGAGCAATTCAAAAGCACCTTGCTGTTTGTTCCTTCTAAACAGCGCGTGTCTTCGGTTGTAGAGTCGGCATTAGGGGACGCATACACTGCTGCAGAAATGAGCTGTGACAAAACTGCGGATTTACAGTCGTCAATAGTGCAGGAGCTGCATCATTATTTATCAGAACCCTTGGCGGATGGCAGCGTTTCTTTACAGGACTTCTGGAAAGGAGCGGCACGCTTCTCTCAGCTACAAAGCGTTTGCCGGACACTGTTGGCGGTCCCGGCTTCTTCAGGAGGATTTCGGAGACTGTTTCCTCTAGCGTCTCGTATTGTTCGTGCTCAGAGAAGCCGGCTGCCGCAGCATACGACAGAAAGACTCCTGCTGTATCGAGAGTCTCTGAAGAACAGCGGCAGAAGTGAAAAACAttga
>TCONS_00042617
GTTCAGTAAACTTATCCAGTGGTTCATTTAAGTCATCTCATAGAAGTGCAGCTGCTTAAAAGAGTAATGGAGACTAAAGTAAATCTTAAAACTAAGTGTGGGACTGATCTCGAGTCTGAGATGGATGAGGATATTGAGCGAACAAAGAGCAAATGGACATCAGCAGAGGATGAAAGTCTTGCAGCCCTGGTGGGGAAGTATGGAAGGAGACAGTGGGAACTGATATCATGCTCTCTACCTCTCATTCAGCTGGTGTCCTTGTATGGTGACAAGTCATGGAGCATAATTTCAAAGAACCTAAAAGGGCGAAGAGGCAAGCAGTGCAGAGAGCGATGGCACAATCATCTGGACCCGTCTGTCATCAAGACACCCTGGACGGCAGCGGAGGATCTAATAATCATAAAATGCCATTGTTTGCTGGGATCCCGTTGGGCACAAATAGCAAAGTTTCTCCCAGGAagGACTGATAATTCGATCAAGAACCATTGGTATTCCACCTTAAAGCGTAAAATGGAGAGGGGCACCTACAAGATGGAGAGTCTTGATTTGAGTGATCTTGGACACCACCAGAAATCCAAGGAAACATCTACTTCGTCAAGTCCTGAAAAGTTGAAGAGCACACCAGAACCATTGTCTAAAACGAAACCGACGAAGAGCATGTTTTTAGAAAACAGCCTGAAGGCCAACGGTCCGCCCCTCTACAATTGCTCCTCTTCACCCTCCAGCTCCAGCAGCCCTCCCACTGTGCCCCCTCAACATAAAGCATATGTTGATGATGTTTTGCAAATGATTGCTGAGGACATGCTACCGCTAAACTTTTGTGAAGGCTGTGGGTTTCGTAAATTCATGAGTTCCGTTGGCCCTCAGCACCCACAGCTCTCGCAGCAGATGATAGCGTCACACCTGTATAATGAAGTGGAGAAGACCATCAAACCTCGGCTGATCCGGCAGCTCAGAAACTGCATATCTCTGAGCGTAGGCCATAATGTCGTTCACGTCACTGCCGACATCTGGGCGAACGAACACACAGAAACTCTTCTAGCCGTCCAGTTGCACTTTCTCGATGACGACTGGAACCTTCACAGGCCTACTGTGGCTTTTCGTCACTTGTCGAGTAAAGAATTGAATACAACAAGAATTGGCGAAGTTGAATCGGTTCTGTTAAGCTACGGGCTTTTCCCCCATAACATTGGTTATAGTATGATCCACGAAGCCAAGAACACTATTTCTACACACGATCTCTTCTGTGACTACAAAATCATGTATTCTGCACAGAAGAACGATCCGGACGAAGATGAATTATTGCGTTTTCTTGACGATCAGGTCGCCATCGATGATTTCTCCATAGCTGAGATGTCATCCACCAAACATCTGGACTGCATAACGACTCTGCTTCATTGCGTAATAAAGGGCGCATTGAGGAAGTCAAGAGTGGTTGAGCGAATACTTTTTGAGGTACAAAGTGTAGTGTCTTTTTTTCGCCGCAGTCCCTACTGGCTAGATGTTCTTACCAAGAAGTGTAAGCTCTCGCTATGCGGCTCTTACAGCACAAGTAGTCTTACCTGGAACTCTACCATCAGTATCATTCGAGAGATGATGCAGGAGTCAGTTTGGGACACCGTGATGGCTGTTCTGATTCAGGCACGCACCGAGGCAAACCACTGTCACATCTCTCCACCAGCAATTCATGTTGCGCGAGAGCAAGTCGTGGATCTGGTTACCTTGCTAGAGCCTTTTGAAGAGGTGGTCCAGTTGCTTCAGGATGATGGCATAACCCTGTCTCTCATCATCCCTTCCATCATCGGACTCGATAAAACACTAGAGATCAAGGACACAAAGTTTAGCCTCTTTTGCTCAGCCTTGCGCTGTGGACTTCGTACTTACTTCCAGCCTCTAATATTGCGAAGCGATCTGTTGCTAGCCACCGTCCTGGACCCACGAATTAAGCTGCAACCCTTCGACTGTGAAAAAGAGCAATTCAAAAGCACCTTGCTGTTTGTTCCTTCTAAACAGCGCGTGTCTTCGGTTGTAGAGTCGGCATTAGGGGACGCATACACTGCTGCAGAAATGAGCTGTGACAAAACTGCGGATTTACAGTCGTCAATAGTGCAGGAGCTGCATCATTATTTATCAGAACCCTTGGCGGATGGCAGCGTTTCTTTACAGGACTTCTGGAAAGGAGCGGCACGCTTCTCTCAGCTACAAAGCGTTTGCCGGACACTGTTGGCGGTCCCGGCTTCTTCAGGAGGATTTCGGAGACTGTTTCCTCTAGCGTCTCGTATTGTTCGTGCTCAGAGAAGCCGGCTGCCGCAGCATACGACAGAAAGACTCCTGCTGTATCGAGAGTCTCTGAAGAACAGCGGCAGAAGTGAAAAACAttga

Function

symbol description
mybl2a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in mitotic cell cycle and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in dorsal aorta; hematopoietic stem cell; and intermediate cell mass of mesoderm. Orthologous to human MYBL2 (MYB proto-oncogene like 2).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-980526-529 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in mitotic cell cycle and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in dorsal aorta; hematopoietic stem cell; and intermediate cell mass of mesoderm. Orthologous to human MYBL2 (MYB proto-oncogene like 2).

Ensembl:

ensembl_id ENSDARG00000095241

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042615 False 2810 mRNA 0.47 8 4348265 4357768
TCONS_00042616 False 2421 mRNA 0.47 7 4348479 4357655
TCONS_00042617 True 2382 mRNA 0.47 6 4350897 4357655

Neighbor

gene id symbol gene type direction distance location
XLOC_021435 sgk2a coding upstream 3674 4324625 ~ 4344591 (+)
XLOC_021434 l3mbtl1a coding upstream 29847 4299887 ~ 4318418 (+)
XLOC_021433 l3mbtl1 coding upstream 52522 4288964 ~ 4295743 (+)
XLOC_021432 NA coding upstream 67158 4273916 ~ 4281107 (+)
XLOC_021431 srsf6a coding upstream 76281 4260458 ~ 4271984 (+)
XLOC_021437 adtrp1 coding downstream 4695 4362463 ~ 4367415 (+)
XLOC_021438 ptpdc1b coding downstream 15568 4373336 ~ 4390318 (+)
XLOC_021439 wnt7ab coding downstream 56396 4414164 ~ 4433220 (+)
XLOC_021440 nup210 coding downstream 125315 4483083 ~ 4557964 (+)
XLOC_021441 LO017700.2 coding downstream 201796 4559564 ~ 4677500 (+)
XLOC_021427 FP102158.1 non-coding upstream 403531 3939908 ~ 3944734 (+)
XLOC_021426 CU682640.1 non-coding upstream 432511 3913304 ~ 3915754 (+)
XLOC_021423 NA non-coding upstream 810522 3537283 ~ 3537743 (+)
XLOC_021421 NA non-coding upstream 921905 3425601 ~ 3426360 (+)
XLOC_021448 NA non-coding downstream 772214 5129982 ~ 5141915 (+)
XLOC_021452 NA non-coding downstream 1237880 5595648 ~ 5623669 (+)
XLOC_021455 CABZ01026153.1 non-coding downstream 1513738 5871506 ~ 5922464 (+)
XLOC_021460 NA non-coding downstream 1970578 6328346 ~ 6341688 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00003875 NA coding CM030121.1 CM030121.1 22790248 ~ 22801229 (-)