XLOC_002147


Basic Information

Item Value
gene id XLOC_002147
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24815304 ~ 24819159 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005713
GTTTCGGGCTATGCTGACTTACATAAATGCGCTCAGAGGCACGGGAAAGATCATGTCAACGATGTCTTCACTGCGCAAAGACATGCTCCCATACCCTGAGAATCCCTCTGTTCCTGGAATTCATTTCTTCCCTCAGGGCAGCAGAGCTGAAGAAGACGCAGGAGGTGAAGCAAGGCTCTGATGCTGCATCATCCTGATCAAATCTCTCCAGCACTTAGTGTAGCAGATTGCCAGAAGCTATTAGCCATATCCTGACAGAGTCACCACAGTCTGGGGCTCCTGCCATCACAAAGATGTCAATTAATATCAAGAGCGACAGGTGCCTGTAGCCCAAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005713 True 336 lncRNA 0.50 2 24815304 24819159

Neighbor

gene id symbol gene type direction distance location
XLOC_002146 tpte coding upstream 107348 24690534 ~ 24707956 (+)
XLOC_002145 thsd1 coding upstream 128801 24684799 ~ 24686503 (+)
XLOC_002143 vps36 coding upstream 131534 24643079 ~ 24683770 (+)
XLOC_002144 NA coding upstream 160120 24650863 ~ 24655184 (+)
XLOC_002142 slc46a3 coding upstream 173904 24627683 ~ 24641400 (+)
XLOC_002148 NA coding downstream 15600 24834759 ~ 24835445 (+)
XLOC_002149 chordc1b coding downstream 385467 25204626 ~ 25213025 (+)
XLOC_002150 grm5a coding downstream 400569 25219728 ~ 25272236 (+)
XLOC_002151 rab38b coding downstream 453196 25272355 ~ 25283609 (+)
XLOC_002152 map3k7cl coding downstream 536149 25355308 ~ 25369173 (+)
XLOC_002139 NA non-coding upstream 403279 24404690 ~ 24412025 (+)
XLOC_002138 CT573163.1 non-coding upstream 416633 24397098 ~ 24398671 (+)
XLOC_002136 NA non-coding upstream 440144 24316853 ~ 24375160 (+)
XLOC_002154 NA non-coding downstream 868475 25687634 ~ 25702407 (+)
XLOC_002156 NA non-coding downstream 943044 25762203 ~ 25765571 (+)
XLOC_002158 BX530083.1 non-coding downstream 1145125 25964284 ~ 25964399 (+)
XLOC_002161 NA non-coding downstream 1449901 26269060 ~ 26273148 (+)
XLOC_002137 CU467963.3 non-coding upstream 461438 24353750 ~ 24353866 (+)

Expression


Co-expression Network