XLOC_002148


Basic Information

Item Value
gene id XLOC_002148
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24834759 ~ 24835445 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005898
AGATGTGCTTTTGTAGTGTTCTTCTCCTGCACAACAGAGAAGAGACGCAGTGGGAAGGCAGCTGATACGCATCTCCACACATAACTCCCCTGGAGCGAgTTCATCATCTTTTCATGTACCCTGATGAACAACTGCTTTTTCATCTTTCTAATATGAAGCATAGCGTCTGCAGAATGAATAGAAAATATGTCACTCCACAGCATTACATTTAGGTTGGCGTGCCTTTCCAACATGCCTTTAATCTATATAAAACAGTGCAGGGGTGTTCAACCTTGTTTTTGAAGTGCAGACATCCTGGGAGTTtatcttcaacacacctgcctaaaAGTTTTGAACCGAGGTCCTGAAAACCTTGATTAGCGGTTTCAGATGTGATGAaacagggttggagctgaactctgcaggataACGCCCCTTCATAAGCATGCTGTGGACCATGAGGGGAGCAGTCTTTCTTATCAGCAGATTCAGACGGGCTGCACTAGAACATCCTCTCCTGATGACTGTGACAATGTCTATAATGCGAGACATTCATAAGTTATCATGTTGCCACCACACCAACATAAAGAATATGACGTCCTGGAGATCACACAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005898 True 595 lncRNA 0.44 2 24834759 24835445

Neighbor

gene id symbol gene type direction distance location
XLOC_002147 NA coding upstream 15600 24815304 ~ 24819159 (+)
XLOC_002146 tpte coding upstream 126803 24690534 ~ 24707956 (+)
XLOC_002145 thsd1 coding upstream 148256 24684799 ~ 24686503 (+)
XLOC_002143 vps36 coding upstream 150989 24643079 ~ 24683770 (+)
XLOC_002144 NA coding upstream 179575 24650863 ~ 24655184 (+)
XLOC_002149 chordc1b coding downstream 369181 25204626 ~ 25213025 (+)
XLOC_002150 grm5a coding downstream 384283 25219728 ~ 25272236 (+)
XLOC_002151 rab38b coding downstream 436910 25272355 ~ 25283609 (+)
XLOC_002152 map3k7cl coding downstream 519863 25355308 ~ 25369173 (+)
XLOC_002153 bach1b coding downstream 533809 25369254 ~ 25385009 (+)
XLOC_002139 NA non-coding upstream 422734 24404690 ~ 24412025 (+)
XLOC_002138 CT573163.1 non-coding upstream 436088 24397098 ~ 24398671 (+)
XLOC_002136 NA non-coding upstream 459599 24316853 ~ 24375160 (+)
XLOC_002154 NA non-coding downstream 852189 25687634 ~ 25702407 (+)
XLOC_002156 NA non-coding downstream 926758 25762203 ~ 25765571 (+)
XLOC_002158 BX530083.1 non-coding downstream 1128839 25964284 ~ 25964399 (+)
XLOC_002161 NA non-coding downstream 1433615 26269060 ~ 26273148 (+)
XLOC_002162 BX530069.2 non-coding downstream 1470784 26306229 ~ 26306343 (+)

Expression


Co-expression Network