XLOC_002155 (ugt5d1)


Basic Information

Item Value
gene id XLOC_002155
gene name ugt5d1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 25726694 ~ 25728744 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004163
AAGTGCTGTTTTTTATTCATGCATGAACAATTAAGGTACAATGAAGTCATTTTTCAGCCAGTCAAATGTTATCACTGGATTATTTTTGGCCTTATCTGCTTTCACCCTGAGCTGCAGTGGAGGTAAAATTCTCCTGTATCCTGTGGATGGAAGCCATTGGGTCAACATGAAAGTCTTGATAGAAGAGCTGCACTCCAGGGGTCACAGCATCACGGTGATCCGACCTAAATCCAGCTGGTACATCACGGAAAAGTCTCCTCTATACACTTCCATCACAATCCAGGACAATGTTAATGATTTTGAAAACTTTTTTGAAGATTATTTATCGAAAGCGATGGAGATAGAGCGAGGCGAAGGTTCTGGACTTGCATTCTTGAAACTCCAATATGATCTGTTCTCAATGCTGTCAACAGCTCATGAAATTGCTTGCAAAATGGTGTCCATTATTTTAGAAGATAAGATGCTTGTAAAAAAACTTCAAGATGAACAGTATGACTTAATGCTCACCGATCCCGCAATAGCAGGGGGAGTGTTTTTAGCACATTATTTAAAGCTGCCTCTTGTTCTCAATGTACGATGGATTACCAGTGGTGAAGGACACTTTGCTATCGCACCATCTCCGATGTCTTACATTCCTTTACCAGGTTCTGGTCATACAGATAAAATGGATTTTGCTCAAagagttaaaaatgttttattcaaaacCTTTACGTTCCTCCAGAACAGATTTGTGGTGGGTCCACATTACGACATACTCATAGACAAGTATCTAGATTACAAAACAGATATTGTTGGCCTTATTCAGGCTGCTGATATCTGGCTCATGAGGGCTGATTTTGTCTTCGAGTTCCCCAGGCCAACCATGCCAAATATTGTTTACATGGGTGGATTTCAATGCAAACCTTCTAAGCCTCTACCAGCAGACCTGGAAGCATTTGCACAGAGTTCAGGAGAGCATGGCTTTATTATTATGTCCTTGGGAACACTTGTCAAAAGTCTCCCAGCCGACATGGCGAATGCTATCGCAGCTGCATTTGCAAGATTACCTCAGAAAGTCATCTGGAGGCATCTTGGAGATCGACCGTCCAATGTTGGGAACAACACACTTATTGTGGACTGGATGCCGCAGAATGACCTCCTGGGACATTCAAAGATCAAAGCGTTTGTGGCTCATGGAGGAACCAATGGAGTGCAGGAGGCCATTTTCCATGGGGTACCAGTTCTGGGAGTCCCTTTGTTCTTCGACCAGTTTGACAACTTAATACGTGTTCAGGGGAAAGGAGCGGGTAAGATACTTAAGCTGTCAGAACTCAATGCCGAAGCTTTCGAACAAGCCCTTCAGGAGTTGCTCAATGACGGCTCCTACAAGAGGAACATGCAGACACTGTCCACTCTGCACAGGGATCAGCCCATGAGGCCATTGGACACGGCCATCTTCTGGATTGAGCATGTGATCAGACATAAAGGTGCAACACACCTGCGCTCAGAGTTTTACAAGATGCCGTGGTACTCGTACCATTCTGTGGACGT

Function

symbol description
ugt5d1 Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in intestine; liver; and testis.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0016740 transferase activity molecular_function
GO:0016757 transferase activity, transferring glycosyl groups molecular_function
GO:0016758 transferase activity, transferring hexosyl groups molecular_function
GO:0008194 UDP-glycosyltransferase activity molecular_function
GO:0015020 glucuronosyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091118-36 Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in intestine; liver; and testis.

Ensembl:

ensembl_id ENSDARG00000002394

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004163 True 1530 mRNA 0.44 2 25726694 25728744

Neighbor

gene id symbol gene type direction distance location
XLOC_002154 NA coding upstream 24287 25687634 ~ 25702407 (+)
XLOC_002153 bach1b coding upstream 341685 25369254 ~ 25385009 (+)
XLOC_002152 map3k7cl coding upstream 357521 25355308 ~ 25369173 (+)
XLOC_002151 rab38b coding upstream 443085 25272355 ~ 25283609 (+)
XLOC_002150 grm5a coding upstream 454458 25219728 ~ 25272236 (+)
XLOC_002156 NA coding downstream 33459 25762203 ~ 25765571 (+)
XLOC_002157 ufm1 coding downstream 219202 25947946 ~ 25962058 (+)
XLOC_002158 BX530083.1 coding downstream 235540 25964284 ~ 25964399 (+)
XLOC_002159 frem2a coding downstream 253468 25982212 ~ 26116636 (+)
XLOC_002160 trim47 coding downstream 389378 26118122 ~ 26128179 (+)
XLOC_002148 NA non-coding upstream 891249 24834759 ~ 24835445 (+)
XLOC_002147 NA non-coding upstream 907535 24815304 ~ 24819159 (+)
XLOC_002144 NA non-coding upstream 1071510 24650863 ~ 24655184 (+)
XLOC_002139 NA non-coding upstream 1314669 24404690 ~ 24412025 (+)
XLOC_002161 NA non-coding downstream 540316 26269060 ~ 26273148 (+)
XLOC_002162 BX530069.2 non-coding downstream 577485 26306229 ~ 26306343 (+)
XLOC_002164 NA non-coding downstream 835477 26564221 ~ 26564521 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_11866424_11868022 UGT5D1 coding CI01000304 null 11866100 ~ 11868083 (+)