XLOC_021665 (CR354612.1)


Basic Information

Item Value
gene id XLOC_021665
gene name CR354612.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 22291440 ~ 22295429 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042998
ATGCCACCGAGAGAACACCCTTGTGCTATTTTAGGATGTAAGGCTCAGCACAAGAGCCTTCACCGTCTTCCTGCAAATGAGCAACAGAGGCTTAAGTGGCTGAGTTTTATCTTTGAAGACAAGGTGCCTGAAAATGTACCAAAAATGTTGTATGTTTGCGCTAACCACTTTAGCGTAGACTGCCTCGAGAACGCGGGACAATACAACTCCGGATTCGCgagtaaattgtttttgaaaactggaTCAGTTCCTACAATACGTGATCCTGTCTCACTTCAAGCCACGACGTCGACAAAGAGCAACAAGGTGGATGTAGCTTGCCAGACAGAACCTTTTCACACATCTTTACACAGTGTTGGCACCCAGTTGTCTTTTAGGACGCTTCAGGCTAAACGCAGGAGTACAAGTGTCCAGACAACAATATCCAGTTTTGAACTGACTGTGCCATCAGCGTCCTCTACTGCGTTTATGACTTCGACACCCCTCAAACCTTCACTAAAAAGACCTCGTCTggagctggaggaggaggaggaagaagaagaagccgAAGAGACTTTGACAGAGTCAAAAATTATAGCCCAAGACTCGGATGTGACATTTGACCCTGCAGAGGAATGCACATCTGCAACTGAACCAACAGACTTGTCaatccAAGAATGCCCAGTTCATAACATTGCCAAGTTCATTGTCTATGAAACATGCCTCATGGAGCTCTTCAGTGACTGCCCAGTGTGTCAGAGGAGATGTGATGTAAAGTCACAAAGGCTTGGGACATTTCTGAGCGTACAGCAAGTCTGCCCACACTGCGAGTTTGTAAGAAAATGGAACAGTCAGCCAATTATTGGTAGTACTCCAGCTGGCAACCTGCATCTTTCTGCTGCAGTCTACTTGAGCGGTGCATCATTTTTTGTAGTTGAAAAGGTATTTGCTGCCATGaaactacacatttttaaatataattcatttcgCCGTCATGCAAGACTTTGCATTGAACCTgctattgtccacaagtggagaAATTGGCAGAGTGAAATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGagTAATGAGGTGGGTGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACCGACAtcctcaaatacagaaatacctCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGTTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAATTTTCCGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTATAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTCCCTTTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCTTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAGAAGTGAAGACACAGCAAACTTTCggtatgtatataaatgtttatagtattattaataattcaataaataaaaaaaataattgcactttacaTTCACAATGA
>TCONS_00042999
ATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGagTAATGAGGTGGGTGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACCGACAtcctcaaatacagaaatacctCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGTTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAATTTTCCGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTATAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTCCCTTTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCTTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAGAAGTGAAGACACAGCAAACTTTCgGTTATGTAGAAGAGCTGCTGGACCTCATCTTCAACCAAGTGTTTGTGGACCCATCACCCTATGTTGATGAAGTGTTGGGAATTCACATACCACCTGCTCTATCATCAGCCTACGATCGACCTGAGATGGAGGAGGCTATCTCCAGCAGGGTGACCCGCTTCAATCAATAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114307

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042998 False 2004 mRNA 0.44 10 22291440 22295199
TCONS_00042999 True 1065 mRNA 0.47 7 22293682 22295429

Neighbor

gene id symbol gene type direction distance location
XLOC_021663 slc2a1a coding upstream 78805 22200467 ~ 22212635 (+)
XLOC_021662 eif4g3b coding upstream 230920 21978584 ~ 22060520 (+)
XLOC_021661 lactbl1a coding upstream 316609 21964325 ~ 21974831 (+)
XLOC_021660 NA coding upstream 376514 21906053 ~ 21914926 (+)
XLOC_021659 CR548634.2 coding upstream 507990 21781577 ~ 21783450 (+)
XLOC_021666 NA coding downstream 276729 22572158 ~ 22593289 (+)
XLOC_021667 gpr157 coding downstream 302195 22597624 ~ 22605915 (+)
XLOC_021668 slc2a5 coding downstream 320634 22616063 ~ 22633136 (+)
XLOC_021669 eno1a coding downstream 361048 22656477 ~ 22678882 (+)
XLOC_021670 rerea coding downstream 489946 22785375 ~ 22926495 (+)
XLOC_021656 CR847529.1 non-coding upstream 667591 21623735 ~ 21623849 (+)
XLOC_021651 NA non-coding upstream 816958 21473102 ~ 21474482 (+)
XLOC_021632 CR352228.2 non-coding upstream 1819570 20471755 ~ 20471870 (+)
XLOC_021671 NA non-coding downstream 645103 22940532 ~ 22941229 (+)
XLOC_021672 AL928977.1 non-coding downstream 657950 22953379 ~ 23016301 (+)
XLOC_021678 NA non-coding downstream 1623219 23918648 ~ 23918969 (+)
XLOC_021679 NA non-coding downstream 1728026 24023455 ~ 24071239 (+)

Expression


Co-expression Network