XLOC_021668 (slc2a5)


Basic Information

Item Value
gene id XLOC_021668
gene name slc2a5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 22616063 ~ 22633136 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043005
CAGTCATTTCTTTTAAGTGGTGTTCTTTCTAGACATACTGTAGTTTTAAACCATGGATGAAGAAGTAAACATGAAGAAAGGGGAAAGGAAGGGGAAGGTGACGCTGATCCTGGCTGCAGCCTCTCTGGTTGCTGGATTTGGTTCGTCTTTTCAATATGGATACAACGTAGCTGTGGTCAACTCACCTGCCCCTGAGATGCAGCAGTTCTACAGGCGAATATATGTGGATCGTTATGGCCCAATGTCGGACAATCTCCTCACCCTCTTGTGGTCCGTAACTGTGTCCATGTATCCACTGGGTGGGTTTTTCGGCTCTCTCATGGTGGCTCCATTAGTGAACAAATTTGGAAGAAAAGGCACACTCCTGTTCAATAACATCTTCTCTATTGTTCCCGCTATAATGATGGGTGTGAGTGAAGTGGCGGGGTCATTTGAGATTATTATTGTCGCACGTTTTCTGGTGGGCATCTGTGCAGGTCTGTCTTCCAATGTGGTGCCTATGTATTTGGGAGAGATCGCACCCAAGAATTACAGAGGGGCCGTCGGGATTGTCCCACAGCTTTTCATCACCGTTGGCATTCTTGTCGCCCAGATATTTGGAATTCGTAGTATCCTTGGAAATAAAGAAGgcTGGCCCATCATGTTAGGTCTCACAGGGATTCCAGCTGCCATTGAGCTGCTGCTTCTGCCTTTCTTCCCTGAGAGCCCTCGCTACATGCTCATACAGAAGGGGGATGAAAAAACTGCCAGGAAAGGCCTGCAGCGCCTGCGAGGCTGTGAGGACGTGGATGAGGAGCTTTGTGAGATGCGTGTTGAGGAGCAGTCGGAGCGAGCAGAAGGTCGACTCTCTCTGCTCAACCTCTTCACCTTCCGCTCTCTGCGCTGGCAGCTGCTGTCTGTGATCTTCATGAACATGGGCCAGCAACTGTCAGGAGTCAACGCTATTTATTACTACGCTGACAGCATCTACAGTTCAGCAGGAGTGAGTGAAGATCATGTTCAGTATGTGACTGTCGGGACAGGAGCTGTAAATGTCTTCATGACCATAACAGCTGTGTTCATCGTGGAGAAATCTGGAAGAAAGTTGTTGCTGCTGATCGGTTTTGGCATCTGCTGTGCAGCTTGTGTTATTTTAACCATTGCACTCTACTTTCAGACCACACTGGACTGGATCCCCTACGTCAGCATCGTCTGTGTCATTGTTTACGTCATCGGACATGCCATCGGTCCGAGTCCTATTCCCACTGTAATCACCACCGAGATGTTCCGGCAGTCTTCTAGACCTCCAGCCTTCATGGTGGCCGGATCCGTTCATTGGCTATCTAACTTCACAGTCGGCCTGGTCTTCCCTTTTCTAGAGagAGGCCTGGGCCCATACAGCTTCATCATTTTTGCTTGCATCTGCCTCGCCACACTGATTTACATCTGGATTGTCATCCCAGAGACCAAAAAcaagacgtttctggagaccagcAAGCTGTTTGCTCAGAGAAACAAGGTGGAGATTATGGCGGAGGCCTCAGACTCTGAGATCAAAGGGACGGGAGAGGGAAACTGTGGACAGGAAATTAGCAGCACATTTCTCTGAATGGGTAAGAGTTACTCATAAAGGATATGTTTATGCATCTGTGCTGACTTCTAATCTTTTATGTGTCAATCTGTCTGTGTGATCCTTCAATCCTGTGTTGAAAAATACTTGTATTATGCCTTTTATTGGATTCTTAATTTAGATTGATGACAAAGAATATGTAAGAATCAGAATAATATGTATACTTTGGTTTAAAATGCATGTGCCTGTTTCTTGCAAATGTGCTTTTTGTGTTCTTTTAtagttttgctgttgttgttgtatgGTTGTGATGTCGATTTCGGTAAAGGTTTAATGATTGATGTAACATTCtcataaaaagtaatatattttatttttaaaaaatatcttcatggttaaatgtattatttactgatatcatttatttttttaagccttTATACTTTTGCTATCATAAAGATAAAATGATCTGATCTGGTTAATCTTTAAATGTAATGTTGTACTATATTGAGTATGATATAAGTGTATTCATGTAtggatgaatatataaataaataagacttttaatTACCAAA
>TCONS_00044673
AGAAGTAAACATGAAGAAAGGGGAAAGGAAGGGGAAGGTGACGCTGATCCTGGCTGCAGCCTCTCTGGTTGCTGGATTTGGTTCGTCTTTTCAATATGGATACAACGTAGCTGTGGTCAACTCACCTGCCCCTGAGATGCAGCAGTTCTACAGGCGAATATATGTGGATCGTTATGGCCCAATGTCGGACAATCTCCTCACCCTCTTGTGGTCCGTAACTGTGTCCATGTATCCACTGGGTGGGTTTTTCGGCTCTCTCATGGTGGCTCCATTAGTGAACAAATTTGGAAGAAAAGGCACACTCCTGTTCAATAACATCTTCTCTATTGTTCCCGCTATAATGATGGGTGTGAGTGAAGTGGCGGGGTCATTTGAGATTATTATTGTCGCACGTTTTCTGGTGGGCATCTGTGCAGGCTGTCTTCCAATGTGGTGCCTATGTATTTGGGAGAGATCGCACCCAAGAATTACAGAGG

Function

symbol description
slc2a5 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart; integument; liver; muscle; and pleuroperitoneal region. Orthologous to human SLC2A5 (solute carrier family 2 member 5).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
ko04973 Carbohydrate digestion and absorption
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-060222-2 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart; integument; liver; muscle; and pleuroperitoneal region. Orthologous to human SLC2A5 (solute carrier family 2 member 5).

Ensembl:

ensembl_id ENSDARG00000077875

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043005 False 2124 mRNA 0.43 12 22616063 22633136
TCONS_00044673 True 476 lncRNA 0.48 5 22616123 22617632

Neighbor

gene id symbol gene type direction distance location
XLOC_021667 gpr157 coding upstream 10148 22597624 ~ 22605915 (+)
XLOC_021666 NA coding upstream 22774 22572158 ~ 22593289 (+)
XLOC_021664 rap1gap coding upstream 190806 22267374 ~ 22425257 (+)
XLOC_021665 CR354612.1 coding upstream 320634 22291440 ~ 22295429 (+)
XLOC_021663 slc2a1a coding upstream 403428 22200467 ~ 22212635 (+)
XLOC_021669 eno1a coding downstream 23341 22656477 ~ 22678882 (+)
XLOC_021670 rerea coding downstream 152239 22785375 ~ 22926495 (+)
XLOC_021671 NA coding downstream 307396 22940532 ~ 22941229 (+)
XLOC_021672 AL928977.1 coding downstream 320243 22953379 ~ 23016301 (+)
XLOC_021673 samd11 coding downstream 387573 23020709 ~ 23123901 (+)
XLOC_021660 NA non-coding upstream 701137 21906053 ~ 21914926 (+)
XLOC_021659 CR548634.2 non-coding upstream 832613 21781577 ~ 21783450 (+)
XLOC_021656 CR847529.1 non-coding upstream 992214 21623735 ~ 21623849 (+)
XLOC_021651 NA non-coding upstream 1141581 21473102 ~ 21474482 (+)
XLOC_021678 NA non-coding downstream 1285512 23918648 ~ 23918969 (+)
XLOC_021679 NA non-coding downstream 1390319 24023455 ~ 24071239 (+)
XLOC_021680 dre-mir-200b non-coding downstream 1438893 24072029 ~ 24072110 (+)

Expression


Co-expression Network