XLOC_021671


Basic Information

Item Value
gene id XLOC_021671
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 22940532 ~ 22941229 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044819
GACCTACCAGTTGCCAACTGCCACCAAGCAGCCCCTGGTAGGACGCCTGACTCACCAGCCAGTTGTTAATGGCCACCAAACAGCCACTGGTAGGACACCTGACCCACCAGCCAGTTGTTAATGTCCACCAAACAGCCACTGGTAGGACACCTGACCCACCAGCCAGTTGTTAATGTCCACCAAACAGCCACTGGTAGGACACCTGACCCACCAGCCAGTTGTTAATGTCCACCAAGCAGCCCCTGGTAGGACGCCTGACTCACCAGCCAGTTGTTAATGGCCACCAACCAGGCTCTGGCTGCCAGTTGTCAACTGCCGGGTAAAATGCGCTGCCACTGGCAGGTCATGCTACCTGACAGTTGGACACTGGCGGCTGCCACCAGCCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044819 True 386 lncRNA 0.58 2 22940532 22941229

Neighbor

gene id symbol gene type direction distance location
XLOC_021670 rerea coding upstream 14037 22785375 ~ 22926495 (+)
XLOC_021669 eno1a coding upstream 261650 22656477 ~ 22678882 (+)
XLOC_021668 slc2a5 coding upstream 307396 22616063 ~ 22633136 (+)
XLOC_021667 gpr157 coding upstream 334617 22597624 ~ 22605915 (+)
XLOC_021666 NA coding upstream 347243 22572158 ~ 22593289 (+)
XLOC_021672 AL928977.1 coding downstream 12150 22953379 ~ 23016301 (+)
XLOC_021673 samd11 coding downstream 79480 23020709 ~ 23123901 (+)
XLOC_021674 klhl17 coding downstream 240808 23182037 ~ 23214599 (+)
XLOC_021675 plekhn1 coding downstream 290907 23232136 ~ 23252668 (+)
XLOC_021676 agrn coding downstream 544629 23485858 ~ 23914687 (+)
XLOC_021660 NA non-coding upstream 1025606 21906053 ~ 21914926 (+)
XLOC_021659 CR548634.2 non-coding upstream 1157082 21781577 ~ 21783450 (+)
XLOC_021656 CR847529.1 non-coding upstream 1316683 21623735 ~ 21623849 (+)
XLOC_021651 NA non-coding upstream 1466050 21473102 ~ 21474482 (+)
XLOC_021678 NA non-coding downstream 977419 23918648 ~ 23918969 (+)
XLOC_021679 NA non-coding downstream 1082226 24023455 ~ 24071239 (+)
XLOC_021680 dre-mir-200b non-coding downstream 1130800 24072029 ~ 24072110 (+)
XLOC_021681 dre-mir-200a non-coding downstream 1130931 24072160 ~ 24072245 (+)

Expression


Co-expression Network