XLOC_021676 (agrn)


Basic Information

Item Value
gene id XLOC_021676
gene name agrn
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 23485858 ~ 23914687 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043027
ACTCTCAGCACAGATATGAGCGCAGACCGCACACAACTTTGAGGAACATCGAGAGCAGCGCGCGCTAGGATTACTATTTTCACTCAACTAACTGCAGAAGTCCTCCGGCGTTTGTATTGCGAGTTCCCAACTTTCCTTTTCATCCGTTCGGTTTGGCCATGGGCTCTGCGGACAGAAAAGCGGTTTATTGGCCCGTTTGGTCATTTGCTCTGGTTTTTGTGCTTTTGATTCAGCGTTGTCATGGAGGTTGTTCCGAAAAGGAGCTGGAGAAGAGAGAAGAAGAAGCGAATGTAGTTTTAACCGGGACTGTGGAGGAGATCTTGAACATGGATCCGGTGCACAACACTTATTCCTGCAAGGTCAGAGTATGGCGCTACCTGAAAGGCAAGACCATGGTAAATGGAGAAGTGCTGCTGGATGGAGGAAACAAAGTGATGATCGGTGGGTTTGGGGACCCCCATATTTGTGACAATCAAGTGGCCACCGGAGATACCCGCATTTTCTTTGTCAACTTGGCTCCTGAGTACATGTGGCCGAACCACAAGAACGAACTGATGCTCAACTCAAGCCTGATGAGGATTACTCTCCGCAACTTGGAGGAGGTAGAGCACTGCgttgaagATAAACCTGTTCACTTCACACCGGCACCTCCTCCTGATGGTTGCAGAGGGAAGTTGTGCGGATTTGGAGCGGTGTGTGAGAGAGACCAAGCTGACCCATCTaaaggagagtgtgtgtgtaagaagaTTGTGTGTACATCTGTGGTGGCGCCAGTGTGCGGATCTGACTCCTCCACCTATTCCAATGAGTGTGAGCTGGAGAAGGCTCAGTGCAATACACAGAGACGCATCAAGGTGATGCGCAAAGGCCCCTGCGCCCTCAAGGACCCGTGCAGTGAGGTAACCTGTAGCTTTGGCAGCACCTGCATCCAGTCATCGGATGGTCTGTCCGCCAAGTGTATGTGTCCTCTGAGCTGTGAAAACGTCCCCAAGCATGTGGTGTGTGGCAGTGACGGCCTGGACTACCAAAGCGAATGTGAACTCAACATGAAGGCCTGCGCCACTCAGAAGAACATCCGTGTGCATCACCAGGGCCGCTGCGATCCTTGCAGTGACACTCTGAACAGCTTAAGCACAGCCTGTCGAGTCAACCCAAAGACCTACCAGCAGATTACCTTTGCCCCGGCTGAGTCTTGTCCGCCTGACGAAATGCCCATCTGTGCCAGCGACGGACACACCTACGAGAGCATGTGTCAGATGGAGCGCACTGCCCTGAAGAACAACCTGGAGCTCAAAAAGGTCTCTTTAGGCAGCTGCAAGGAAAAAGGGGGCTGCCCGAATGGTTGTAAGTTCAACGCCATATGTTTGCTGGATAATGGAGAGTTTCGGTGCTCCTGCGATCCCATACAATGCGACGGCACGTACAAGCCCCTGTGCGGAAAGGATGGCAAGACATACCCCAACGACTGCGAGAGGAAACTGCAGGAATGCCGGACCCAAAAAGACATCCCTGTCAAACAACAAGGGCCCTGTGATCTTAACCTGGAGAGCCCCTGCCTGAAGAAGACCTGCGAGTTTGGAGCCGTGTGCGTGGTGAAGAACAGCGAAGCAGTGTGTGAATGCTCAGACGCCTGTCCGCAGGACCAAGACCCTGTTTGCGGCAGCGATGGGCACACGTACAGCAGCTCATGTCAAATGAAGGCCATGGGATGCGCTCTTCAGAAACAGATACAGATGCAACACAAAGGACCATGTGCAGATGAGTCCTGCACCAACTGCTCGTTTGGCGCGATCTGTGATGCCCAGACTGGCCGGTGCGTGTGCCCTAAAGGCTGTTTGGAAACACGGCAGCCCGTATGCGGCAGCGACGGCACCACGTATGACAACGAGTGCAAGCTCAACGTCCAAGCCTGCACTAAACAGCTGGATCTCAAGGTGGTGGCCCATGGAGAATGCAAAACCTGTGGCAGCACTGTGTGTAGCTGGGGGTCGCAGTGCGTGAACAACAAGTGTGAGTGTCAGCAGTGCACTGGTCAGCCGGTGAAACCCGTGTGTGGCAGCGACGGCAACACATACAACAACGACTGCGAGCTGAGACTGGCCTCCTGTCAGAAACAGAGGAAGATAGAGGTGGCCAAGCCTGGCGTCTGCGATGAAGACTGTGGTTCAGGAGGCTCCGGCTCGGGATCTGAGACTTGTGAACAGGACCGATGTCGCCGATATGGAGGAACGTGGGACGATGACATGGAGGACGAGCGATGTGTTTGTGAACTAAACTGTCAGATTGTGCTGCACAGCCCGGTGTGCGGCTCTGATGGAAACACGTACTCCAGCGACTGTGAGCTCAAGAAGACCAGGTGCGAAAAGCAAATAGACCTGAGTGTCCAAAGCCAAGGGCCCTGTCCAACTATCGTATCACCACCTCCAGAGCTTGTTGCCTCCCAGCACTGTAGCCAAACAGTTTATGGATGTTGTGAAGATAACAAGACCGCTGCCCTGGGTGTTGGACTGGCTGGATGTCCTAgtaTGTGTCAGTGCAATCATTACGGCTCATACGGAGGCACATGTGACCCCTCGACTGGCCAGTGTTCCTGTAAACCTGGTGTCGGTGGACTGAAGTGCGACCGCTGTGAGCCCGGATTTTGGAACTTCCGTGGCATTGTCACAGAAAACATGAGCGGCTGCACACCGTGCAACTGTGATGGAGTGGGTTCGGTTCGTGATGACTGCGAGCAGATGTCAGGCCTGTGCTCCTGTAAGCCTGGAGTTAAGGGCATGAAATGCAACGTGTGCCCTGATGGCAGCAAGATGGGAGTCAACGGCTGTGACAAAGGACCTAAGGCTCCCAAGTCCTGTGCTGAGCTTGTGTGCCACTTTGGGTCTTCATGCGTGGAGGTGAATGGACAGGCTCACTGTGAGTGTCCTTCACCAGATTGTGATGAGAAAAACAAGACCAAGGTATGTGGTTCTGATGGGGTCACCTATGCAGACCGGTGCCAGCTGAAGACCATCGCATGCCGACAAGATAAAGAGATCAAGGTGGAGCATTTAGGCCAGTGTAAAGAATCCATTGAGCTGACGGCCAAACCCACCCCCTTCCCAACCACCCACCGCACCACCCCTCCCACCGCTCACGTCAAGGTCACCAAACAGCGACATGGCCACCGCACCACCACTCCGGACAGCTATGTGGTGGAGGCAATGCCTCCACCGAGGTTGGATGGAGCGCGAAAGTTTTCCAGCCCTTTCACCACCCACCGTCCCACTACACCCTACAAACCACTCCGCACCTCATCCCCACCTCTGGACTTTGACGAGTCGGGCAGTGGAGAGCCCAGTGGGGATGATGAGATGGTGAGCGGAATGGAGGAGAGCGGAGAAGAGCCACTTGGTACAACAGTAGCTACTACCACTCTTCCCACAGCTGAGGAGCGATCGTCCTGTGACAACACAGCGTTCGGCTGCTGTCCCGATGGGAAGACGGCCGCCGTCAACTCAGAGGGCACAAACTGCCCATCCACCATGCGTTTCAGCGGCTTCCTGCACCTGGATAAGGTTGAGGGTCAGGAGGTCTTCTACACGCCTGAGATGGAGGACCCCAAATCGGAACTGTTTGGTGAAACGGCCCGAAGCATCGAGAGCGCTATGAATGAGTTGTTCCGCAAGTCTGATGTCCAGAAAGACTTCCAGAGTGTCCGTGTGAGGAATCTATCCCCCAGCAACTCCATAATAGCACATTTCGAGGCTCACTTCGACCCAGACACAAGGTTCAATGTGGGGGATATTGAGGGAGCCCTTCTCAAACAGCTTAAGGCGTCTAAAGACACTGGCATCGTTGTGAAGAAACCAGAGGAAGAGAACATTCGCATCAACAACTATGGTCTTTCAACTGTTCCTTTCTTTACCACCACAACAACCACTGTGGCATCTGTCACGACTCccactaccaccaccaccacaatgTCTCCCAGTTCTGCTTATACCACTCTCCGGCCCATCACTACTAGACGACCCTTCACAAGAACCACCACGCCAGCACCAGCCACCACCACTGCACCACATGTGCCCAAGACCACAGTTTCGCTTATGAACAGACTAGGGCCCCACGCTCACAGTCCATGTGACTCTCAGCCCTGCCGACATGGAGGAACCTGTGAAGAAGACGACAATGACTTCACCTGTATCTGTCCAGCAGGACGAGGAGGAGCCGTGTGTGAGAAAGTTATAAAGTACTTCATACCATCCTTTGGTGGAAAGTCTTACATGGCGTTCCAGACCATGAAGGCCTACCATACTGTACGCATTGCCATGGAGTTCAGGGCTTCGGAAATGACTGGGATATTGCTCTACAATGGGCAAAAAAGCAAAAAGGACTTTCTTTCTCTGACTCTAGTTGAAGGATATGTGGAGCTCAGGTTTAACACTGGTTCAGGGACTGCTTCAGTTATCAGTAAAGTCCTGGTAAAGCCGGGTCGCTGGCATCAGCTTGTTGTAGTACGTAACAGGCGCAATGCCATGCTGAGCGTGGACAATGAGCCCAGCGTTGAAGGACAAAGTCCTCCAGGAACAGATGGACTCAACCTGGACACAGACCTTTTCATCGGCGGAGTGCTTGATGACATGAGTGCAGACGTAAAGGAGAGGACATCAGTTTCAGCAGGTCTGGTGGGCTGCATCCGCATGCTGGACGTGAACAACCTTGTCTATAATCTGCAAGAGAATGGCGGCAGCGTTCTGTACGGTTCGGCCATTGGCGAGTGTGGCAACAACCCATGCCTGCCAAACCCCTGCAAGAACGGAGCGTCCTGTCAGGTCAAAGAAGCCGAGATTTTCCACTGCAAATGTGTCAACGGTTTCTCTGGCCCGACCTGCGCTGATGCCCACAATCCCTGCGACCCCAATAAATGCCACCCGCCATCACGGTGCCAGGTCCTTCCAGAGGGAGGTTACAAATGCGAATGTCCGATGGGACGTGAAGGCAGGCACTGTGAAAAAGTGTCAGACAAGGGAGGCGCTTTCATTCCTTACTTCACTGGAGATTCTTTTCTGGAGCTCAAAGGCCTCCATACGTATAACCAGGATCTCAGGCAAAAATTCAGCATGACTATCGTTCTACTGGCCAATGACTCCAAAGGCATGATCTTCTACAATGGTCAGAAGACAGACGGCAAAGGGGATTTCATCTCGCTCTCTCTTAATGACGGCATCCTGGAGTTTAGATATGACCTGGGCAAAGGGCCAGCTGTCATTAGGAGTAAAGAAAAAATCAAGCTGAACGAGTGGAACACAGTGAATTTGGAACGGGCCAGCAGAAAAGGAGAGATTAGCATTAACGGCAAAGACCCTGTCAGAGGAGAGGCGCCGAATCAGCACACGGATCTCAATCTGAAGGAATCGCTCTTTGTGGGTGGAGCTCCTGATTTCCGCAAAGTAGCCAGAGCTGCTGCGATCAAAGATGGCTTCAAAGGGGCCATTCAGAAGATTACTTTGATGGGAATTCCAATCCTGAAAGCTGATAATGCCCTTTCGTCCACTGACGTGTCCATGTATCCTAATCATCCCTGCTCCAAAGACGTTTGTGAGAATGGAGGCCGCTGCAACCCCCAGCTGAACAGCTATGAGTGCGCCTGCCGCCACGGATTCTCCGGACACCACTGCCAGGACACAATATTTGAGAAGTCCGCTGGGGACACGGAGGCCATTGCGTTTGATGGTCATACATTCATCGAATATCACAACGGAGTCACCAAAAGCGAGAAAGCCCTGCTGGTGAATAAATTCGAGCTGAGCATCAGGACGGAGGCTACGCATGGTCTGATTTTGTGGAGCGGAAAGGGAGTTGAGCGCTCTGACTACATCGCCCTCGCCATTGTGGATGGAAGAGTACAGATGACCTATGACCTCGGCTCCAAGCCTGTGGTGCTGCGCTCCACTGTACGGGTCAACACCAACCACTGGATACGAATTAAGGCCAGCAGAGCGCTCAGAGATGGCTCTCTGCAGGTTGGTAATGAGGCAGCTGTCACTGGGTCTTCACCCTTGGCTGCCACACAGCTGGACACAGACGGGGCTCTCTGGTTGGGTGGACTGGAGGAGCTGTCTGTGGCTCGACGGCTGCCCAAAGCTTACAGTACAGGCTTCATTGGCTGCGTCAAAGACGTGATAGTGGACGGCGTGGAGCTGCATCTGGTGGAGGACGCCTTAAATACTCCCAAAATATCACACTGTTCTGCCAAATAA
>TCONS_00043028
ttactaattcaccaagcTGTGGAGATCTGCGCTTGTGGATTTAAAGTACAAAGTGCAGTGGGGATTGTTTGCACTCACTTGTCCGAGTTGCCAATCTAGGCCAGGGGTCCAGTGGAGCTTTTGTCAAACACACTTGAGAGAACTTACACACTAACCTTTCATGACAAATCACCGATGCTTGGGAAAGAAATGGAGGGATTGTCGGAAGGTTAGGGACTCTAGGACCAGTACCCTACCAGAGAGGCTGTAATTTGGGAACAAAATGCGTTGCTTGGAGACTGGTGAAAGCATTCGTCTACGTTTTTCAGGAAGGAACTGCGATAAGAAGCATCACCGGAGTTTTAGCTGAAACCCTTTTTGGATTTCTTTTGTCTACCCTTTTTCTCTGAGTCTGTTTGGAACGCTTGCCAACTTGGCGTACTTTAGGGAAGGCGCGGAGTGGAGTATGACCAGTTGTCAGTACCCCACGCCGCCCCCAGAGCGGGACCGCATGTACCAGCACAAAGTGTCGCTGGTCGTGCGATACTTCATGATTCCTTGCAACATCTGTCTCATACTGCTGGCCACATCCACGCTCGGCTTTGCTGTACTCCTCTTCCTCAATAACTATAAACCTGTTCACTTCACACCGGCACCTCCTCCTGATGGTTGCAGAGGGAAGTTGTGCGGATTTGGAGCGGTGTGTGAGAGAGACCAAGCTGACCCATCTaaaggagagtgtgtgtgtaagaagaTTGTGTGTACATCTGTGGTGGCGCCAGTGTGCGGATCTGACTCCTCCACCTATTCCAATGAGTGTGAGCTGGAGAAGGCTCAGTGCAATACACAGAGACGCATCAAGGTGATGCGCAAAGGCCCCTGCGCCCTCAAGGACCCGTGCAGTGAGGTAACCTGTAGCTTTGGCAGCACCTGCATCCAGTCATCGGATGGTCTGTCCGCCAAGTGTATGTGTCCTCTGAGCTGTGAAAACGTCCCCAAGCATGTGGTGTGTGGCAGTGACGGCCTGGACTACCAAAGCGAATGTGAACTCAACATGAAGGCCTGCGCCACTCAGAAGAACATCCGTGTGCATCACCAGGGCCGCTGCGATCCTTGCAGTGACACTCTGAACAGCTTAAGCACAGCCTGTCGAGTCAACCCAAAGACCTACCAGCAGATTACCTTTGCCCCGGCTGAGTCTTGTCCGCCTGACGAAATGCCCATCTGTGCCAGCGACGGACACACCTACGAGAGCATGTGTCAGATGGAGCGCACTGCCCTGAAGAACAACCTGGAGCTCAAAAAGGTCTCTTTAGGCAGCTGCAAGGAAAAAGGGGGCTGCCCGAATGGTTGTAAGTTCAACGCCATATGTTTGCTGGATAATGGAGAGTTTCGGTGCTCCTGCGATCCCATACAATGCGACGGCACGTACAAGCCCCTGTGCGGAAAGGATGGCAAGACATACCCCAACGACTGCGAGAGGAAACTGCAGGAATGCCGGACCCAAAAAGACATCCCTGTCAAACAACAAGGGCCCTGTGATCTTAACCTGGAGAGCCCCTGCCTGAAGAAGACCTGCGAGTTTGGAGCCGTGTGCGTGGTGAAGAACAGCGAAGCAGTGTGTGAATGCTCAGACGCCTGTCCGCAGGACCAAGACCCTGTTTGCGGCAGCGATGGGCACACGTACAGCAGCTCATGTCAAATGAAGGCCATGGGATGCGCTCTTCAGAAACAGATACAGATGCAACACAAAGGACCATGTGCAGATGAGTCCTGCACCAACTGCTCGTTTGGCGCGATCTGTGATGCCCAGACTGGCCGGTGCGTGTGCCCTAAAGGCTGTTTGGAAACACGGCAGCCCGTATGCGGCAGCGACGGCACCACGTATGACAACGAGTGCAAGCTCAACGTCCAAGCCTGCACTAAACAGCTGGATCTCAAGGTGGTGGCCCATGGAGAATGCAAAACCTGTGGCAGCACTGTGTGTAGCTGGGGGTCGCAGTGCGTGAACAACAAGTGTGAGTGTCAGCAGTGCACTGGTCAGCCGGTGAAACCCGTGTGTGGCAGCGACGGCAACACATACAACAACGACTGCGAGCTGAGACTGGCCTCCTGTCAGAAACAGAGGAAGATAGAGGTGGCCAAGCCTGGCGTCTGCGATGAAGACTGTGGTTCAGGAGGCTCCGGCTCGGGATCTGAGACTTGTGAACAGGACCGATGTCGCCGATATGGAGGAACGTGGGACGATGACATGGAGGACGAGCGATGTGTTTGTGAACTAAACTGTCAGATTGTGCTGCACAGCCCGGTGTGCGGCTCTGATGGAAACACGTACTCCAGCGACTGTGAGCTCAAGAAGACCAGGTGCGAAAAGCAAATAGACCTGAGTGTCCAAAGCCAAGGGCCCTGTCCAACTATCGTATCACCACCTCCAGAGCTTGTTGCCTCCCAGCACTGTAGCCAAACAGTTTATGGATGTTGTGAAGATAACAAGACCGCTGCCCTGGGTGTTGGACTGGCTGGATGTCCTAgtaTGTGTCAGTGCAATCATTACGGCTCATACGGAGGCACATGTGACCCCTCGACTGGCCAGTGTTCCTGTAAACCTGGTGTCGGTGGACTGAAGTGCGACCGCTGTGAGCCCGGATTTTGGAACTTCCGTGGCATTGTCACAGAAAACATGAGCGGCTGCACACCGTGCAACTGTGATGGAGTGGGTTCGGTTCGTGATGACTGCGAGCAGATGTCAGGCCTGTGCTCCTGTAAGCCTGGAGTTAAGGGCATGAAATGCAACGTGTGCCCTGATGGCAGCAAGATGGGAGTCAACGGCTGTGACAAAGGACCTAAGGCTCCCAAGTCCTGTGCTGAGCTTGTGTGCCACTTTGGGTCTTCATGCGTGGAGGTGAATGGACAGGCTCACTGTGAGTGTCCTTCACCAGATTGTGATGAGAAAAACAAGACCAAGGTATGTGGTTCTGATGGGGTCACCTATGCAGACCGGTGCCAGCTGAAGACCATCGCATGCCGACAAGATAAAGAGATCAAGGTGGAGCATTTAGGCCAGTGTAAAGAATCCATTGAGCTGACGGCCAAACCCACCCCCTTCCCAACCACCCACCGCACCACCCCTCCCACCGCTCACGTCAAGGTCACCAAACAGCGACATGGCCACCGCACCACCACTCCGGACAGCTATGTGGTGGAGGCAATGCCTCCACCGAGGTTGGATGGAGCGCGAAAGTTTTCCAGCCCTTTCACCACCCACCGTCCCACTACACCCTACAAACCACTCCGCACCTCATCCCCACCTCTGGACTTTGACGAGTCGGGCAGTGGAGAGCCCAGTGGGGATGATGAGATGGTGAGCGGAATGGAGGAGAGCGGAGAAGAGCCACTTGGTACAACAGTAGCTACTACCACTCTTCCCACAGCTGAGGAGCGATCGTCCTGTGACAACACAGCGTTCGGCTGCTGTCCCGATGGGAAGACGGCCGCCGTCAACTCAGAGGGCACAAACTGCCCATCCACCATGCGTTTCAGCGGCTTCCTGCACCTGGATAAGGTTGAGGGTCAGGAGGTCTTCTACACGCCTGAGATGGAGGACCCCAAATCGGAACTGTTTGGTGAAACGGCCCGAAGCATCGAGAGCGCTATGAATGAGTTGTTCCGCAAGTCTGATGTCCAGAAAGACTTCCAGAGTGTCCGTGTGAGGAATCTATCCCCCAGCAACTCCATAATAGCACATTTCGAGGCTCACTTCGACCCAGACACAAGGTTCAATGTGGGGGATATTGAGGGAGCCCTTCTCAAACAGCTTAAGGCGTCTAAAGACACTGGCATCGTTGTGAAGAAACCAGAGGAAGAGAACATTCGCATCAACAACTATGGTCTTTCAACTGTTCCTTTCTTTACCACCACAACAACCACTGTGGCATCTGTCACGACTCccactaccaccaccaccacaatgTCTCCCAGTTCTGCTTATACCACTCTCCGGCCCATCACTACTAGACGACCCTTCACAAGAACCACCACGCCAGCACCAGCCACCACCACTGCACCACATGTGCCCAAGACCACAGTTTCGCTTATGAACAGACTAGGGCCCCACGCTCACAGTCCATGTGACTCTCAGCCCTGCCGACATGGAGGAACCTGTGAAGAAGACGACAATGACTTCACCTGTATCTGTCCAGCAGGACGAGGAGGAGCCGTGTGTGAGAAAGTTATAAAGTACTTCATACCATCCTTTGGTGGAAAGTCTTACATGGCGTTCCAGACCATGAAGGCCTACCATACTGTACGCATTGCCATGGAGTTCAGGGCTTCGGAAATGACTGGGATATTGCTCTACAATGGGCAAAAAAGCAAAAAGGACTTTCTTTCTCTGACTCTAGTTGAAGGATATGTGGAGCTCAGGTTTAACACTGGTTCAGGGACTGCTTCAGTTATCAGTAAAGTCCTGGTAAAGCCGGGTCGCTGGCATCAGCTTGTTGTAGTACGTAACAGGCGCAATGCCATGCTGAGCGTGGACAATGAGCCCAGCGTTGAAGGACAAAGTCCTCCAGGAACAGATGGACTCAACCTGGACACAGACCTTTTCATCGGCGGAGTGCTTGATGACATGAGTGCAGACGTAAAGGAGAGGACATCAGTTTCAGCAGGTCTGGTGGGCTGCATCCGCATGCTGGACGTGAACAACCTTGTCTATAATCTGCAAGAGAATGGCGGCAGCGTTCTGTACGGTTCGGCCATTGGCGAGTGTGGCAACAACCCATGCCTGCCAAACCCCTGCAAGAACGGAGCGTCCTGTCAGGTCAAAGAAGCCGAGATTTTCCACTGCAAATGTGTCAACGGTTTCTCTGGCCCGACCTGCGCTGATGCCCACAATCCCTGCGACCCCAATAAATGCCACCCGCCATCACGGTGCCAGGTCCTTCCAGAGGGAGGTTACAAATGCGAATGTCCGATGGGACGTGAAGGCAGGCACTGTGAAAAAGTGTCAGACAAGGGAGGCGCTTTCATTCCTTACTTCACTGGAGATTCTTTTCTGGAGCTCAAAGGCCTCCATACGTATAACCAGGATCTCAGGCAAAAATTCAGCATGACTATCGTTCTACTGGCCAATGACTCCAAAGGCATGATCTTCTACAATGGTCAGAAGACAGACGGCAAAGGGGATTTCATCTCGCTCTCTCTTAATGACGGCATCCTGGAGTTTAGATATGACCTGGGCAAAGGGCCAGCTGTCATTAGGAGTAAAGAAAAAATCAAGCTGAACGAGTGGAACACAGTGAATTTGGAACGGGCCAGCAGAAAAGGAGAGATTAGCATTAACGGCAAAGACCCTGTCAGAGGAGAGGCGCCGAATCAGCACACGGATCTCAATCTGAAGGAATCGCTCTTTGTGGGTGGAGCTCCTGATTTCCGCAAAGTAGCCAGAGCTGCTGCGATCAAAGATGGCTTCAAAGGGGCCATTCAGAAGATTACTTTGATGGGAATTCCAATCCTGAAAGCTGATAATGCCCTTTCGTCCACTGACGTGTCCATGTATCCTAATCATCCCTGCTCCAAAGACGTTTGTGAGAATGGAGGCCGCTGCAACCCCCAGCTGAACAGCTATGAGTGCGCCTGCCGCCACGGATTCTCCGGACACCACTGCCAGGACACAATATTTGAGAAGTCCGCTGGGGACACGGAGGCCATTGCGTTTGATGGTCATACATTCATCGAATATCACAACGGAGTCACCAAAAGCGAGAAAGCCCTGCTGGTGAATAAATTCGAGCTGAGCATCAGGACGGAGGCTACGCATGGTCTGATTTTGTGGAGCGGAAAGGGAGTTGAGCGCTCTGACTACATCGCCCTCGCCATTGTGGATGGAAGAGTACAGATGACCTATGACCTCGGCTCCAAGCCTGTGGTGCTGCGCTCCACTGTACGGGTCAACACCAACCACTGGATACGAATTAAGGCCAGCAGAGCGCTCAGAGATGGCTCTCTGCAGGTTGGTAATGAGGCAGCTGTCACTGGGTCTTCACCCTTGGCTGCCACACAGCTGGACACAGACGGGGCTCTCTGGTTGGGTGGACTGGAGGAGCTGTCTGTGGCTCGACGGCTGCCCAAAGCTTACAGTACAGGCTTCATTGGCTGCGTCAAAGACGTGATAGTGGACGGCGTGGAGCTGCATCTGGTGGAGGACGCCTTAAATACTCCCAAAATATCACACTGTTCTGCCAAATAATCTGGCAACGCGCTCCTCCCAACACCATGTCTACTGCTgtaattattttttctattttttgtatACTTTCCTTTCGCCTTTTATAttggaaaacaaaaaaattacattgttttaattacacttttgtttgtttggtttattttcatCCCCTCCCCCCTGTCTTTGCGTCCAACCCGTAATCGTGCTCTCATTCGGCGAACATGGTGACATAAAGACTAGCAAAAAGTCCCATTTACGTCTGTGCTGTTTCTACGGTAAACACCACGATCATTACTTGAACAGTGGCAGATGAGATTCAGGATTGCCTTTTCTCAGTGCCATAACATGATCCATTCATTCCTCTGAGCTGCTGTCGCTGTGCTCCTTGCTACGTTTTAAAGGTCTAAAAAATAAACAGCTTTCTGCTTTATCGACAGATGACAGCAACTGTTAAATACACCGAGCAAGACTATGAAACCACTAACGAGTAGCTGACGTAACATTAGCATTCCTCAAAAATCACGTCATTGACCTGTGAGATGTTATAAATATTGATGAAAAATACACGAGACTGTGACTTTTTGaagatgctatttttttttttttggttgctaTCATTCATGTGTTGTgcatatctaaaatataaatatatatagagaaataCATATATGCTATAAGACCACTTGTTGCATGCATCTTTTTAGAAGTGTTGGGTTGATTTTgcctcagttttgttttgttttgttttgctcatCATTCCATTCAGGGCAGAAATGTAGCTGACTACATTGCAATTTTGACATCTGGTTATTTCAATTTGGGAGATTAATTTTATATCTGCTATTTGTCAATCTGAGCAaattgtgagtgagtgtgtgtgtgtgtgagtggatgtGTTGGAAAAAACGGTTGTTGCAAGAAGTCAACTCTGGGAGGCGCTGTAACACAGGAAGAGACTTAAAACACATAAGGTGGACAAACaacgaaagaaaaaaacattgacaTTCTTGGCATGCTTCATCATCGAACAAATTTCACTACACTTTTTTTCCCCCCTATTGTATCTTATCAAATGTCGCTTTAAAAATGCTGCCAGCACTTGCTATGTAAAAAAGGGATGATGTATGTAAACCCCCCTTGCATCCTGTTCAACATGTTCGGTAACCAGTGAAAATAGTAATGCATGGGTTTGTCAAGTCAAAATGGTTTTGTAAACCTGTTCCGAGACAAATGCAATGCTGTGGTGCTGTTCGGTGTGAGAAATATTATGAGTTTGATACCTGATGCTTTGCAATATTCCACTACAAATATGCCTGTTTAGGGTAAagtatcttttttgtttttgttttatttttttttaacaaatcctCTTTGGACATGCAAGATCATAATCGTCATCATGTACAGCCCTGTGATTTTCAAGTGTAAATTTGTTActgagtttctttttctttttttagtattATACACTGGAAGTGAGTTATGGGATACTGGGAATAATGGATGATTTTTTTGGGTCGTCACAGGATGTCATGTTACTGCACGAGACGTATGGACCGTCCACCTTTTTTTTTAGTATAGCGCTTTCACCTTCACTTTTCCAGCAGACTGGATTTctgatctttctttttttttttgtaatttttttttgctttgttttttgacATCCTCCTCCAGTAGCTTTTGCTCTCAAGGGAAGCGAGAACCGCATTGGAAAACCTGCTGTGTGAATGGAAACTGAGAAATGCCTTAAAATCATTCACCGTTCACAGGTGACAAAAGTTCATGTCCATACTGTTCTGTGCTCTCACTTCTATTAGCCTCATCAtgtaaattaattcataaatgttaataaatatattaataataatgcgtAAGAGAATTTCCAGAAGGCCTCGATAATAGTGGTTCTGGACTCTACAAGAATACTATTTACTGTACAAATACTATTTTCAGTATCTTATTTATGTCTTAAGAGGATTCTCAGTCTGGCATTTGTAaactattgattgattgattgattgattgactgactgattgattgattgactgaacTAGATCTGATGGGCAGTGCAGAATGAGAGGCATGACGTTACCATTACTAACTTTATTACTTGTGTCTTGTGTTCCTCCAACCaccatacaaataaaatgtaaaacaaactgATCTGACTACTGTAACACTTACTCCTGAATAATGTCTGTGAATAAATCCCTCCAGTTCCCAAA

Function

symbol description
agrn Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within anterior/posterior pattern specification and nervous system development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including immature eye; nervous system; neural tube; notochord; and pronephric duct. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 8. Orthologous to human AGRN (agrin).

GO:

id name namespace
GO:1902572 negative regulation of serine-type peptidase activity biological_process
GO:0007213 G protein-coupled acetylcholine receptor signaling pathway biological_process
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0043113 receptor clustering biological_process
GO:0009952 anterior/posterior pattern specification biological_process
GO:0007409 axonogenesis biological_process
GO:0007417 central nervous system development biological_process
GO:0007422 peripheral nervous system development biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function
GO:0043236 laminin binding molecular_function

KEGG:

id description
ko04512 ECM-receptor interaction
ko00535 Proteoglycans

ZFIN:

id description
ZDB-GENE-030131-1033 Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within anterior/posterior pattern specification and nervous system development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including immature eye; nervous system; neural tube; notochord; and pronephric duct. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 8. Orthologous to human AGRN (agrin).

Ensembl:

ensembl_id ENSDARG00000079388

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043027 False 6239 mRNA 0.53 36 23485858 23912479
TCONS_00043028 True 8434 mRNA 0.49 35 23658474 23914687

Neighbor

gene id symbol gene type direction distance location
XLOC_021675 plekhn1 coding upstream 233190 23232136 ~ 23252668 (+)
XLOC_021674 klhl17 coding upstream 271259 23182037 ~ 23214599 (+)
XLOC_021673 samd11 coding upstream 361957 23020709 ~ 23123901 (+)
XLOC_021672 AL928977.1 coding upstream 469557 22953379 ~ 23016301 (+)
XLOC_021671 NA coding upstream 544629 22940532 ~ 22941229 (+)
XLOC_021677 ptpn11b coding downstream 3734 23918421 ~ 23995856 (+)
XLOC_021678 NA coding downstream 3961 23918648 ~ 23918969 (+)
XLOC_021679 NA coding downstream 108768 24023455 ~ 24071239 (+)
XLOC_021680 dre-mir-200b coding downstream 157342 24072029 ~ 24072110 (+)
XLOC_021681 dre-mir-200a coding downstream 157473 24072160 ~ 24072245 (+)
XLOC_021666 NA non-coding upstream 892569 22572158 ~ 22593289 (+)
XLOC_021660 NA non-coding upstream 1570932 21906053 ~ 21914926 (+)
XLOC_021659 CR548634.2 non-coding upstream 1702408 21781577 ~ 21783450 (+)
XLOC_021682 dre-mir-429a non-coding downstream 159128 24073815 ~ 24073896 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_08271059_08344201 AGRN coding CI01000001 null 8271059 ~ 8344201 (+)