G222658


Basic Information

Item Value
gene id G222658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9595705 ~ 9599657 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254299
gtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacaactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatggaggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatggaggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacaactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggtgttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacataactgtgtcaactaggacatgggggttgacagtccacagcaacatgAGGATCATTCTGCCCTGAAACAGTTGCTGTTCCTATTCCTCTTTTGTTCTTTTTTCTCAAGTGTCTCTGAACCTCAGTGGTAGTTTTACCTCTCCACCTCTGGAGGTCATTCTCACCAGTTGTGGTGAGGCTGGCTGAGGTGGTGGACTGAGTGAGAGGATGGGAGTTGGATGGCTCACTGGTAGACTGGGTGACTCTTTTGTTGTTCTCTCTGGAGTAGGTGACTCTGCAAAATCCTGAAGGTGTCGCCTGTTTCTCTGAGCGATGGTGCCGTGTTCAGTTTCCACAACGTAGGATCTCGGCTCTGGATATTTGCTGATGACAACTGCTGGTGTTTTCCATCTTTTCTCTCCGTCCAGATTGACTCTGACACCCTGTCCAGGGTGTAATTCCAGTAGGGGTGTACTGTATGCCTCCTGTTATAGAAGAACCGGTAAGCTTGTTTGGCTTTCTGGTCCTTCTGTTTAACAGTGTTATGGCTGAAGCGTTTTGGTTGGAGTTTCCCATCCAGCACGGGGACCGTGCTGGCTAGTGGTAGTGGGCAGGTGAGCTATTTCTGtgtccctagaatagtagtcACCACTATGTGGCATTTCTAatgtccctagaatagtagtcaccactatgtggtatttatatgtccctagaatagtagaacaccactatgtggtatttctatgtccctagaatagtcgtcaccactatgtggtatttctaatgtccctagaatagtagaacaccactatgtggtatttctatgtccctagaatagtagtcCACCACTATGAGGTATTtctatgtccctagaatagtagtcCACCACTATGAGGTATTtctatgtccctagaatagtagtcaccactatgtggtatttctaatgtccctagaatagtagaacaccactatgtggtatttctatgtccctagaatagtagtcaccactatgtggtatttctatgtccctagaatagtagtcCACCACTATGAGGTATTtctatgtccctagaatagtagtcCACCACTATGAGGTATTtctatgtccctagaatagtagtccaccactatgtggtatttctatgtccctagaatagtagtccaccactatgtggtatttctatgtccctagaatagtagtcCACCACTATGAGGTATTTCTTGCCCTCGAGCTCACGCAGGTCGGCTGCGATCTTCAGCCACAGACCCTTAGGTAAAGGTGTCATGACAAGTGCTTCTCTCTTTTGAGTTGGTTTGTTCTCTGTACAGAACCTGCATGACAGAACCTGCATGACTTCACCTTTCTGGCGAAGTGGACGCTGATCTGCTCTGACTGGCGCAGGATTTGTGTTGCCCTCTCCAGTGTCAAGTCTGGCTCCAGCTGTagcttttgtgaaacatcactgTCCATCATGCCAATCACAATACTGTCCCTTATTTGTTTGTCCTTAGTAGTTCCAAACTTGCAGTATCATACAGATTCCTCACAAAAGATTCCACTGTCTGAATGCGCCTTTCTGAATGCGCTGTGGCACAAAATGTTCATTCCGTTTTTCAATCATGCATTGTAGACAATATCTGCATTTTTCCCCATTGCATAAAGTTGCACCACATCGGGCTCCTTTTCCAGTTTCAATGCCAC

Function

NR:

description
PREDICTED: uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254299 True 2437 lncRNA 0.46 2 9595705 9599657

Neighbor

gene id symbol gene type direction distance location
LOC110520821 LOC106574299 coding downstream 1051 9559133 ~ 9594654 (-)
LOC110508584 LOC104949237 coding downstream 44062 9528874 ~ 9551643 (-)
LOC110508594 LOC106605789 coding downstream 70392 9515908 ~ 9525313 (-)
LOC110508582 LOC106575046 coding downstream 144456 9446264 ~ 9451249 (-)
LOC110508575 prpf3 coding downstream 194583 9390287 ~ 9401122 (-)
LOC110536519 LOC106573729 coding upstream 3544 9603201 ~ 9641233 (-)
cyp11b cyp11b coding upstream 41981 9641638 ~ 9653952 (-)
LOC118945353 LOC106594169 coding upstream 54636 9654293 ~ 9656911 (-)
LOC118944443 LOC106573533 coding upstream 66205 9665862 ~ 9673439 (-)
LOC110534283 LOC106573819 coding upstream 80101 9679758 ~ 9689081 (-)
G222657 NA non-coding downstream 375 9595020 ~ 9595330 (-)
G222607 LOC106574954 non-coding downstream 98852 9494796 ~ 9496853 (-)
G222600 NA non-coding downstream 118805 9474040 ~ 9476900 (-)
G222511 NA non-coding downstream 150003 9445037 ~ 9445702 (-)
G222505 NA non-coding downstream 150853 9441801 ~ 9444852 (-)
G222661 NA non-coding upstream 13007 9612664 ~ 9623056 (-)
G222662 NA non-coding upstream 20554 9617625 ~ 9622934 (-)
G222672 NA non-coding upstream 37592 9637249 ~ 9637907 (-)
G222680 NA non-coding upstream 57476 9657133 ~ 9659694 (-)
G222685 NA non-coding upstream 76281 9675938 ~ 9676294 (-)
LOC110501040 LOC106605812 other downstream 477332 9101425 ~ 9118437 (-)
G222465 NA other downstream 500489 9093180 ~ 9095216 (-)
LOC110508696 ndufa3 other upstream 401758 10001415 ~ 10002941 (-)
G223070 NA other upstream 413304 10012961 ~ 10014892 (-)

Expression


Co-expression Network