G223070


Basic Information

Item Value
gene id G223070
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10012961 ~ 10014892 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254805
TTTCTCTTTCGTGTGTTAGTGGCTGTAGCCATGGCCCCTGGCGGCTCTGGGGCCTGCGCTGACATTCTGGTCTCCATCAGTATCTGACGGAGGTCTGTAGGAAGcTTGAGGCCCTCAGAGGCCTGTGTGTAGGAGTGGGGTCCGTTGAGGAGACTCCCACCACCGGGGATACTGTCGGAAAACGAGGGGGACGGAGAGCTGGGGGGCAAGGTGATGGAGTTGATGAGGCTGGGACCGTTGTCCataGGCTGACTGGCTGAGGAGGTCAGCGAGGAAGGCTGGCTGCTCTGTGATTGGCTGGGTGTGCTGAAGGCGGACTCTGCTGTGCTCTCTGCCACCACAGCACTGTAACTTGTGCTTCCGTTCTGCTTCAGTCCACTGGGCGGTCTGGCAGGGGCTGCGTTCGACCCAACTACTCCTCCGATTGGCCCCATGCTTCCTCCGTTTCCTCCCATCATCCCCACTGCCCCCCCAGGGGCAGCACCAACAGGGCTGAGAGGGATCAGAGGGGGCCCAGGGATCACACTCTGCCCAGGCACCAGGCCCAGGATCCCCCCAGTCAGGGAGCCGTGTGCTGGGCTGGACCCCAGCAGGCCCAGGCCTGTCCCAGCCCCGTTGGTGGTCACTCCACTGGAGCAAGAGGTGGGGATGGAGGAGCTCTCCAGTGAGACACTGGACTGGGTAGTGGTACTCAGACCCAGGCCTCCCAACGCGGCTGCCTGGGCGTAAGGGGCATGGGTGGACCCAGAGAGCAGGCCTGCCATGGTGTTCAGAGAGGCAGACATCCCAGTCAGGCCCAGACCAGACATTGAGTTGGCACTGCTTGTCCCCGTCATGCCAACTTTACCCAGGCCCAACCCAAGGCCTAGGCTGGAGTTGAGGATATGACCAGGCGAGACCTGGGGCAGGGAGTTTGGGGAGGCTGAGATGGGTGTGGTgggtgtggggagagagggggcggTGGAGAGAAGGGGGTGGCTGGGTGGGCTGGGGGTGCAAGGTTTTGTTTggggttgttgtggttgttgcaGTGGCTGCAGGACTGGTTGCTGTGGAGGTTGAGGCTGATGTTGTTGTACGGCGCTGCTGAAGCTTCCTATTAGACTGTTGCTTGTGGGAACCCCAGGGTTGCCTCCGACAACGGCGGCCATGGAgacaagagaggaggaagaagaggacccGGAATTGGCGGACGAGGAAAAGGACAACAACAAGGAGGAAGTGCCGTTCTTCG

Function

NR:

description
CCR4-NOT transcription complex subunit 3 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254805 True 1234 TUCP 0.61 4 10012961 10014892

Neighbor

gene id symbol gene type direction distance location
LOC110508696 ndufa3 coding downstream 10020 10001415 ~ 10002941 (-)
LOC110508630 LOC106605751 coding downstream 52929 9943081 ~ 9960032 (-)
LOC110536579 LOC106593149 coding downstream 299773 9708802 ~ 9713188 (-)
LOC110534283 LOC106573819 coding downstream 323880 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 coding downstream 339573 9665862 ~ 9673439 (-)
LOC110508724 prpf31 coding upstream 4421 10019313 ~ 10024005 (-)
LOC110520824 lmtk3 coding upstream 9556 10024448 ~ 10047484 (-)
LOC110508742 LOC106577219 coding upstream 32743 10047635 ~ 10053368 (-)
tmc4 LOC106577196 coding upstream 38643 10053535 ~ 10062470 (-)
mboat7 mboat7 coding upstream 48225 10063117 ~ 10072855 (-)
G223058 NA non-coding downstream 13585 9998968 ~ 9999376 (-)
G223047 NA non-coding downstream 14199 9973761 ~ 9998762 (-)
G223043 NA non-coding downstream 17485 9969605 ~ 9995476 (-)
G223052 NA non-coding downstream 25839 9980349 ~ 9987122 (-)
G223081 NA non-coding upstream 71960 10086852 ~ 10089362 (-)
LOC110520825 LOC106605761 non-coding upstream 84569 10099437 ~ 10128902 (-)
G223112 NA non-coding upstream 128417 10143309 ~ 10143823 (-)
G223115 NA non-coding upstream 138453 10153345 ~ 10153706 (-)
G222662 NA other downstream 390027 9617625 ~ 9622934 (-)
LOC110520821 LOC106574299 other downstream 449996 9559133 ~ 9594654 (-)
znf628 LOC106605829 other upstream 1056054 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 1157228 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 1261025 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1712470 11727284 ~ 11741584 (-)

Expression


Co-expression Network